Domain ID e3m8sA4

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Taq-exonuc
UID: 000394840
Type: Automatic domain
Parent: e1qtmA4
Range: A:294-422
Ligands: ACT
PDB: 3m8s
PDB Description: DNA POLYMERASE I, THERMOSTABLE
UniProt: P19821
Species: Thermus aquaticus

Structure of domain e3m8sA4

Structural contacts of domain e3m8sA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3m8sA2 A:x,y,z->A:Y,X-1,-Z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3m8sA1 A:X-Y-1,-Y-1,-Z-1/3->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e3m8sA3 A:x,y,z->A:-Y,X-Y-1,Z+1/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol