Domain ID e3ofaE1

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 000403095
Type: Automatic domain
Parent: e1pkpA1
Range: E:9-77
PDB: 3ofa
PDB Description:
Species:

Structure of domain e3ofaE1

Domains in the same chain:

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e3ofaE1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3ofaE2 E:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3ofaC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3ofaC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3ofaE1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3ofaE2 E:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3ofaF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3ofaG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3ofaH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3ofaH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3ofaJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3ofaK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ofaL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ofaN1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3ofaO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3ofaP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3ofaR1 R:19-73 HTH HTH tri-helical
e3ofaT1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3ofaE1 of H-group "dsRNA-binding domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ofaC1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol