Domain ID e3ofbK1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000403125
Type: Automatic domain
Parent: e2uubK1
Range: K:12-128
PDB: 3ofb
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e3ofbK1

Domains in the same chain:

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e3ofbK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3ofbC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3ofbC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3ofbE1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3ofbE2 E:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3ofbF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3ofbG1 G:2-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3ofbH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3ofbH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3ofbJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3ofbK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ofbL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ofbN1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3ofbO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3ofbP1 P:1-80 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3ofbR1 R:19-73 HTH HTH tri-helical
e3ofbT1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3ofbK1 of H-group "Ribonuclease H-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ofbG1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol
e3ofbR1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol