ECOD: domain e3ofbR1

Domain ID e3ofbR1

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: Ribosomal_S18

UID:	000403132
Type:	Automatic domain
Parent:	e2uubR1
Range:	R:19-73
PDB:	3ofb
PDB Description:
Species:

Domain
In chain context
In PDB context

Structure of domain e3ofbR1

Domains in the same chain:

Download Pymol

e3ofbR1	R:19-73	HTH	HTH	tri-helical

Domains in the same PDB:

e3ofbC2	C:1-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e3ofbC1	C:106-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e3ofbE1	E:9-77	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e3ofbE2	E:78-158	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3ofbF1	F:1-100	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e3ofbG1	G:2-151	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e3ofbH1	H:1-65	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e3ofbH2	H:66-129	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e3ofbJ1	J:5-102	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e3ofbK1	K:12-128	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3ofbL1	L:1-123	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3ofbN1	N:1-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e3ofbO1	O:1-88	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e3ofbP1	P:1-80	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e3ofbR1	R:19-73	HTH	HTH	tri-helical
e3ofbT1	T:2-86	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e3ofbR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ofbF1	R:x,y,z->F:X,Y,Z	Ribosomal protein S6	Interaction Interface Pymol
e3ofbK1	R:x,y,z->K:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol