| UID: | 001275688 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2u2fA1 |
| Range: | K:81-160 |
| PDB: | 3p6y |
| PDB Description: | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 |
| UniProt: | Q16630 |
| Hsap BLAST neighbor: | Q16630 |
| Species: | Homo sapiens |
Structure of domain e3p6yK2
Domains in the same chain:
| e3p6yK2 | K:81-160 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
Domains in the same PDB:
| e3p6yA1 | A:34-228 | beta-Grasp | Nudix | Nudix |
| e3p6yB1 | B:34-230 | beta-Grasp | Nudix | Nudix |
| e3p6yC2 | C:81-159 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yD2 | D:81-159 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yE1 | E:34-228 | beta-Grasp | Nudix | Nudix |
| e3p6yF1 | F:34-230 | beta-Grasp | Nudix | Nudix |
| e3p6yG2 | G:80-159 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yH2 | H:83-158 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yI1 | I:34-228 | beta-Grasp | Nudix | Nudix |
| e3p6yJ1 | J:34-230 | beta-Grasp | Nudix | Nudix |
| e3p6yK2 | K:81-160 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yL2 | L:80-159 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yM1 | M:34-229 | beta-Grasp | Nudix | Nudix |
| e3p6yN1 | N:34-230 | beta-Grasp | Nudix | Nudix |
| e3p6yO2 | O:81-160 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3p6yP2 | P:84-158 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
Structural contacts of domain e3p6yK2 of H-group "RNA-binding domain, RBD":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3p6yJ1 | K:x,y,z->J:X,Y,Z | Nudix | Interaction Interface Pymol |
| e3p6yF1 | K:-X+1,Y-1/2,-Z+1->F:x,y,z | Nudix | Interaction Interface Pymol |
| e3p6yI1 | K:x,y,z->I:X,Y,Z | Nudix | Interaction Interface Pymol |
| e3p6yG2 | K:X,Y-1,Z->G:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e3p6yF1 | K:X,Y-1,Z->F:x,y,z | Nudix | Interaction Interface Pymol |
