ECOD: domain e3p6yL2

Domain ID e3p6yL2

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	001275696
Type:	Automatic domain
Parent:	e2u2fA1
Range:	L:80-159
PDB:	3p6y
PDB Description:	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6
UniProt:	Q16630
Hsap BLAST neighbor:	Q16630
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3p6yL2

Domains in the same chain:

Download Pymol

e3p6yL2	L:80-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e3p6yA1	A:34-228	beta-Grasp	Nudix	Nudix
e3p6yB1	B:34-230	beta-Grasp	Nudix	Nudix
e3p6yC2	C:81-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yD2	D:81-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yE1	E:34-228	beta-Grasp	Nudix	Nudix
e3p6yF1	F:34-230	beta-Grasp	Nudix	Nudix
e3p6yG2	G:80-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yH2	H:83-158	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yI1	I:34-228	beta-Grasp	Nudix	Nudix
e3p6yJ1	J:34-230	beta-Grasp	Nudix	Nudix
e3p6yK2	K:81-160	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yL2	L:80-159	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yM1	M:34-229	beta-Grasp	Nudix	Nudix
e3p6yN1	N:34-230	beta-Grasp	Nudix	Nudix
e3p6yO2	O:81-160	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3p6yP2	P:84-158	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e3p6yL2 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3p6yI1	L:x,y,z->I:X,Y,Z	Nudix	Interaction Interface Pymol
e3p6yJ1	L:x,y,z->J:X,Y,Z	Nudix	Interaction Interface Pymol
e3p6yJ1	L:x,y,z->J:-X,Y-1/2,-Z+1	Nudix	Interaction Interface Pymol
e3p6yB1	L:x,y,z->B:X,Y,Z	Nudix	Interaction Interface Pymol
e3p6yE1	L:x,y,z->E:X,Y,Z	Nudix	Interaction Interface Pymol