Domain ID e3pzpA1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: IMS_HHH
UID: 000436866
Type: Automatic domain
Parent: e1jx4A1
Range: A:346-405
Ligands: MG
PDB: 3pzp
PDB Description: DNA POLYMERASE KAPPA
UniProt: Q9UBT6
Hsap BLAST neighbor: Q9UBT6
Species: Homo sapiens

Structure of domain e3pzpA1

Domains in the same chain:

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e3pzpA5 A:25-121,A:170-223,A:281-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpA4 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpA1 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpA2 A:406-520 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3pzpA5 A:25-121,A:170-223,A:281-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpA4 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpA1 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpA2 A:406-520 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3pzpB3 B:19-121,B:170-224,B:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpB4 B:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpB1 B:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpB2 B:406-518 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3pzpA1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pzpB3 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3pzpB1 A:X,Y,Z->B:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol