Domain ID e3pzpA2

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  • A: a+b two layers
  • X: Reverse ferredoxin
  • H: Lesion bypass DNA polymerase (Y-family), little finger domain
  • T: Lesion bypass DNA polymerase (Y-family), little finger domain
  • F: IMS_C
UID: 000436867
Type: Automatic domain
Parent: e1jx4A2
Range: A:406-520
PDB: 3pzp
PDB Description: DNA POLYMERASE KAPPA
UniProt: Q9UBT6
Hsap BLAST neighbor: Q9UBT6
Species: Homo sapiens

Structure of domain e3pzpA2

Domains in the same chain:

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e3pzpA5 A:25-121,A:170-223,A:281-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpA4 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpA1 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpA2 A:406-520 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3pzpA5 A:25-121,A:170-223,A:281-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpA4 A:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpA1 A:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpA2 A:406-520 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3pzpB3 B:19-121,B:170-224,B:282-345 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3pzpB4 B:122-169 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3pzpB1 B:346-405 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3pzpB2 B:406-518 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3pzpA2 of H-group "Lesion bypass DNA polymerase (Y-family), little finger domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pzpB2 A:x,y,z->B:-X+1/2,-Y+1/2,Z-1/2 Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol