Domain ID e3sfsH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000147172
Type: Automatic domain
Parent: e1seiA2
Range: H:65-129
PDB: 3sfs
PDB Description:
Species:

Structure of domain e3sfsH2

Domains in the same chain:

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e3sfsH1 H:1-64 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3sfsH2 H:65-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e3sfsC1 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3sfsC2 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3sfsE4 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3sfsE3 E:77-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3sfsF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3sfsG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3sfsH1 H:1-64 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3sfsH2 H:65-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3sfsJ1 J:1-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3sfsK1 K:0-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3sfsL1 L:0-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3sfsN1 N:0-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3sfsO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3sfsP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3sfsR1 R:19-73 HTH HTH tri-helical
e3sfsT1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3sfsW10 W:3-281 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3sfsW12 W:282-395 cradle loop barrel RIFT-related Alanine racemase-C
e3sfsW11 W:392-527 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e3sfsH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sfsE3 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3sfsL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol