Domain ID e3sfsJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 000147174
Type: Automatic domain
Parent: e2uubJ1
Range: J:1-102
PDB: 3sfs
PDB Description:
Hsap BLAST neighbor: P60866
Species:

Structure of domain e3sfsJ1

Domains in the same chain:

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e3sfsJ1 J:1-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e3sfsC1 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3sfsC2 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3sfsE4 E:9-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3sfsE3 E:77-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3sfsF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3sfsG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3sfsH1 H:1-64 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3sfsH2 H:65-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3sfsJ1 J:1-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3sfsK1 K:0-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3sfsL1 L:0-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3sfsN1 N:0-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3sfsO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3sfsP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3sfsR1 R:19-73 HTH HTH tri-helical
e3sfsT1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3sfsW10 W:3-281 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3sfsW12 W:282-395 cradle loop barrel RIFT-related Alanine racemase-C
e3sfsW11 W:392-527 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e3sfsJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sfsN1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e3sfsC1 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e3sfsK1 J:x,y,z->K:X-1/2,-Y-1/2,-Z Ribonuclease H-like Interaction Interface Pymol