Domain ID e3v2cE4

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 001277374
Type: Automatic domain
Parent: e1pkpA1
Range: E:5-72
Ligands: MG
PDB: 3v2c
PDB Description:
Species:

Structure of domain e3v2cE4

Domains in the same chain:

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e3v2cE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3v2cE3 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3v2cC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3v2cC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3v2cE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3v2cE3 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3v2cF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3v2cG1 G:1-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3v2cH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3v2cH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3v2cJ1 J:1-98 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3v2cK1 K:1-119 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3v2cL1 L:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3v2cN1 N:1-60 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3v2cO2 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3v2cP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3v2cR2 R:20-87 HTH HTH tri-helical
e3v2cT1 T:1-99 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3v2cY1 Y:2-104 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)

Structural contacts of domain e3v2cE4 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3v2cC1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol