Domain ID e3vraB1

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  • A: alpha arrays
  • X: alpha-helical ferredoxin-like
  • H: alpha-helical ferredoxin
  • T: alpha-helical ferredoxin
  • F: Fer4_17
UID: 001159203
Type: Automatic domain
Parent: e1nekB1
Range: B:139-281
Ligands: AT5 F3S HEM SF4
PDB: 3vra
PDB Description: Iron-sulfur subunit of succinate dehydrogenase
UniProt: O44074
Hsap BLAST neighbor: P21912
Species: Ascaris suum

Structure of domain e3vraB1

Domains in the same chain:

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e3vraB4 B:33-138 beta-Grasp Ubiquitin-related Ubiquitin-like
e3vraB1 B:139-281 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin

Domains in the same PDB:

e3vraA3 A:33-269,A:390-485 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3vraA1 A:270-389 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3vraA2 A:486-645 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e3vraB4 B:33-138 beta-Grasp Ubiquitin-related Ubiquitin-like
e3vraB1 B:139-281 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e3vraC1 C:34-186 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vraD1 D:28-156 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vraE2 E:33-269,E:390-485 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e3vraE1 E:270-389 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e3vraE3 E:486-645 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e3vraF4 F:33-138 beta-Grasp Ubiquitin-related Ubiquitin-like
e3vraF1 F:139-281 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e3vraG1 G:34-186 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e3vraH1 H:28-156 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e3vraB1 of H-group "alpha-helical ferredoxin":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vraA3 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3vraA1 B:x,y,z->A:X,Y,Z Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Interaction Interface Pymol
e3vraC1 B:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3vraD1 B:X,Y,Z->D:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol