ECOD: domain e3vtiA12

Domain ID e3vtiA12

A: few secondary structure elements
X: Zinc finger domain in hydrogenase maturation protein HypF
H: Zinc finger domain in hydrogenase maturation protein HypF
T: Zinc finger domain in hydrogenase maturation protein HypF
F: zf-HYPF

UID:	001187858
Type:	Automatic domain
Parent:	e3tsqA1
Range:	A:142-192
Ligands:	ZN
PDB:	3vti
PDB Description:	HYDROGENASE MATURATION FACTOR
UniProt:	Q8RDB0
Species:

Domain
In chain context
In PDB context

Structure of domain e3vtiA12

Domains in the same chain:

Download Pymol

e3vtiA15	A:8-104	Alpha-beta plaits	Acylphosphatase-like	Acylphosphatase-like
e3vtiA13	A:105-141	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiA12	A:142-192	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiA14	A:193-390	YrdC/RibB	YrdC/RibB	YrdC/RibB
e3vtiA17	A:391-495	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vtiA16	A:496-751	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Domains in the same PDB:

e3vtiA15	A:8-104	Alpha-beta plaits	Acylphosphatase-like	Acylphosphatase-like
e3vtiA13	A:105-141	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiA12	A:142-192	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiA14	A:193-390	YrdC/RibB	YrdC/RibB	YrdC/RibB
e3vtiA17	A:391-495	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vtiA16	A:496-751	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vtiB15	B:8-105	Alpha-beta plaits	Acylphosphatase-like	Acylphosphatase-like
e3vtiB13	B:106-141	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiB12	B:142-191	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF	Zinc finger domain in hydrogenase maturation protein HypF
e3vtiB14	B:192-390	YrdC/RibB	YrdC/RibB	YrdC/RibB
e3vtiB17	B:391-498	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vtiB16	B:499-751	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3vtiC4	C:60-172	Bacillus chorismate mutase-like	PurM N-terminal domain-like	PurM N-terminal domain-like
e3vtiC3	C:173-342	Alpha-beta plaits	PurM C-terminal domain-like	PurM C-terminal domain-like
e3vtiD4	D:60-172	Bacillus chorismate mutase-like	PurM N-terminal domain-like	PurM N-terminal domain-like
e3vtiD3	D:173-342	Alpha-beta plaits	PurM C-terminal domain-like	PurM C-terminal domain-like

Structural contacts of domain e3vtiA12 of H-group "Zinc finger domain in hydrogenase maturation protein HypF":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vtiB13	A:x,y,z->B:X,Y,Z-1	Zinc finger domain in hydrogenase maturation protein HypF	Interaction Interface Pymol
e3vtiA16	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol