Domain ID e3zefD1

Download files:
  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: ARM repeat
  • T: ARM repeat
  • F: AAR2
UID: 001309337
Type: Automatic domain
Parent: e4i43A2
Range: D:152-355
PDB: 3zef
PDB Description: A1 CISTRON-SPLICING FACTOR AAR2
UniProt: P32357
Species: Saccharomyces cerevisiae

Structure of domain e3zefD1

Domains in the same chain:

Download Pymol

e3zefD2 D:2-151 Immunoglobulin-like beta-sandwich N-terminal domain in A1 cistron-splicing factor AAR2 N-terminal domain in A1 cistron-splicing factor AAR2
e3zefD1 D:152-355 Repetitive alpha hairpins ARM repeat ARM repeat

Domains in the same PDB:

e3zefA2 A:2-169 Immunoglobulin-like beta-sandwich N-terminal domain in A1 cistron-splicing factor AAR2 N-terminal domain in A1 cistron-splicing factor AAR2
e3zefA1 A:169-355 Repetitive alpha hairpins ARM repeat ARM repeat
e3zefB1 B:883-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3zefB2 B:1256-1575 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3zefB5 B:1594-1827 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e3zefB3 B:1831-2091,B:2150-2154 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3zefB4 B:2153-2387 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e3zefD2 D:2-151 Immunoglobulin-like beta-sandwich N-terminal domain in A1 cistron-splicing factor AAR2 N-terminal domain in A1 cistron-splicing factor AAR2
e3zefD1 D:152-355 Repetitive alpha hairpins ARM repeat ARM repeat
e3zefE1 E:883-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3zefE2 E:1256-1574 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3zefE3 E:1596-1827 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e3zefE4 E:1831-2096 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3zefE5 E:2153-2396 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like

Structural contacts of domain e3zefD1 of H-group "ARM repeat":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zefE2 D:X,Y,Z->E:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3zefE3 D:X,Y,Z->E:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e3zefE4 D:X,Y,Z->E:x,y,z Ribonuclease H-like Interaction Interface Pymol
e3zefE1 D:X,Y,Z->E:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3zefE5 D:X,Y,Z->E:x,y,z Cytidine deaminase-like Interaction Interface Pymol
e3zefE5 D:-X-1,Y-1/2,-Z+1/2->E:x,y,z Cytidine deaminase-like Interaction Interface Pymol
e3zefB1 D:x,y,z->B:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol