Domain ID e3zndO2

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  • A: alpha arrays
  • X: S15/NS1 RNA-binding domain
  • H: S15/NS1 RNA-binding domain
  • T: S15/NS1 RNA-binding domain
  • F: Ribosomal_S15
UID: 001211482
Type: Automatic domain
Parent: e3j6vO1
Range: O:2-89
PDB: 3znd
PDB Description:
Hsap BLAST neighbor: P82914
Species:

Structure of domain e3zndO2

Domains in the same chain:

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e3zndO2 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain

Domains in the same PDB:

e3zndC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3zndC1 C:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3zndE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3zndE3 E:73-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3zndF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3zndG1 G:1-154 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3zndH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3zndH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3zndJ1 J:1-96 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3zndK2 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3zndL1 L:1-121 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3zndN1 N:1-59 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3zndO2 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3zndP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3zndR2 R:19-88 HTH HTH tri-helical
e3zndT1 T:1-92 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3zndO2 of H-group "S15/NS1 RNA-binding domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3zndF1 O:x,y,z->F:X,Y,Z Ribosomal protein S6 Interaction Interface Pymol