Domain ID e4c3jA6

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  • A: a+b complex topology
  • X: central helical domain in RNA-polymerase beta-prime subunit
  • H: central helical domain in RNA-polymerase beta-prime subunit
  • T: central helical domain in RNA-polymerase beta-prime subunit
  • F: RNA_pol_Rpb1_5
UID: 002126129
Type: Automatic domain
Parent: e4c3hA7
Range: A:1181-1234,A:1545-1663
PDB: 4c3j
PDB Description: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190
UniProt: P10964
Hsap BLAST neighbor: O95602
Species: Saccharomyces cerevisiae

Structure of domain e4c3jA6

Domains in the same chain:

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e4c3jA5 A:1-141,A:172-275,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4c3jA3 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e4c3jA8 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e4c3jA1 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4c3jA2 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4c3jA4 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e4c3jA6 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4c3jA9 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c3jA7 A:1262-1399,A:1438-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e4c3jA5 A:1-141,A:172-275,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4c3jA3 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e4c3jA8 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e4c3jA1 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4c3jA2 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4c3jA4 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e4c3jA6 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4c3jA9 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c3jA7 A:1262-1399,A:1438-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4c3jB1 B:12-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c3jB7 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e4c3jB5 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e4c3jB4 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e4c3jB2 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e4c3jB3 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4c3jB6 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4c3jC1 C:30-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4c3jC2 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e4c3jD1 D:12-49,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4c3jE2 E:1-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e4c3jE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e4c3jF1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e4c3jG3 G:8-123 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e4c3jG4 G:124-174,G:214-316 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c3jH1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4c3jI1 I:2-67 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c3jI2 I:68-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c3jJ1 J:1-69 HTH RPB10 RPB10
e4c3jK1 K:40-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4c3jL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4c3jM1 M:8-114 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e4c3jN1 N:23-180 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains