Domain ID e4cmpA2

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Cas9_RuvC
UID: 001710428
Type: Automatic domain
Parent: e4cmqB2
Range: A:4-57,A:718-766,A:925-1102
PDB: 4cmp
PDB Description: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1
UniProt: Q99ZW2
Species:

Structure of domain e4cmpA2

Domains in the same chain:

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e4cmpA2 A:4-57,A:718-766,A:925-1102 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4cmpA4 A:58-447,A:503-567,A:587-714 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4cmpA5 A:775-924 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4cmpA3 A:1137-1200 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4cmpA1 A:1201-1363 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Domains in the same PDB:

e4cmpA2 A:4-57,A:718-766,A:925-1102 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4cmpA4 A:58-447,A:503-567,A:587-714 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4cmpA5 A:775-924 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4cmpA3 A:1137-1200 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4cmpA1 A:1201-1363 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain
e4cmpB1 B:4-57,B:718-766,B:925-1102 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4cmpB3 B:58-447,B:502-713 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4cmpB5 B:773-924 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4cmpB2 B:1137-1200 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4cmpB4 B:1201-1363 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Structural contacts of domain e4cmpA2 of H-group "Ribonuclease H-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4cmpB3 A:x,y,z->B:X,Y,Z-1 CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4cmpB4 A:-X-1/2,Y-1/2,-Z->B:x,y,z CRISPR-associated endonuclease Cas9 C-terminal domain Interaction Interface Pymol
e4cmpB5 A:-X-1/2,Y-1/2,-Z->B:x,y,z His-Me finger endonucleases Interaction Interface Pymol
e4cmpB3 A:-X-1/2,Y-1/2,-Z->B:x,y,z CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4cmpB2 A:-X-1/2,Y-1/2,-Z->B:x,y,z SSHS domain in CRISPR-associated endonuclease Cas9 Interaction Interface Pymol
e4cmpB3 A:X-1/2,-Y-1/2,-Z->B:x,y,z CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol