| UID: | 000148670 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2yclA2 |
| Range: | D:1-323 |
| Ligands: | B12 GOL |
| PDB: | 4djd |
| PDB Description: | Corrinoid/iron-sulfur protein small subunit |
| UniProt: | Q07341 |
| Species: | Moorella thermoacetica |
Structure of domain e4djdD1
Domains in the same chain:
| e4djdD1 | D:1-323 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Domains in the same PDB:
Structural contacts of domain e4djdD1 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4djdC4 | D:x,y,z->C:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e4djdC1 | D:x,y,z->C:X,Y,Z | B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit | Interaction Interface Pymol |
| e4djdF1 | D:X-1/2,-Y+1/2,-Z->F:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4djdA1 | D:x,y,z->A:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e4djdF1 | D:-X+1/2,Y-1/2,-Z->F:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4djdE4 | D:X-1/2,-Y+1/2,-Z+1->E:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4djdB1 | D:X,Y,Z-1->B:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4djdE4 | D:X-1/2,-Y+1/2,-Z->E:x,y,z | TIM barrels | Interaction Interface Pymol |
| e4djdB1 | D:x,y,z->B:X,Y,Z | TIM barrels | Interaction Interface Pymol |
