Domain ID e4gdkE6

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ATG5_UblA
UID: 001210625
Type: Automatic domain
Parent: e2dymA1
Range: E:3-115
Ligands: NA
PDB: 4gdk
PDB Description: Autophagy protein 5
UniProt: Q9H1Y0
Hsap BLAST neighbor: Q9H1Y0
Species: Homo sapiens

Structure of domain e4gdkE6

Structural contacts of domain e4gdkE6 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gdkD2 E:x,y,z->D:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e4gdkE6 E:x,y,z->E:X-1,Y,Z Ubiquitin-related Interaction Interface Pymol
e4gdkE8 E:X-1,Y,Z->E:x,y,z Helical domain in autophagy protein 5 Interaction Interface Pymol
e4gdkE6 E:X-1,Y,Z->E:x,y,z Ubiquitin-related Interaction Interface Pymol