Domain ID e4gdkB3

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ATG5_UblB
UID: 001159195
Type: Automatic domain
Parent: e2dymA3
Range: B:177-275
PDB: 4gdk
PDB Description: Autophagy protein 5
UniProt: Q9H1Y0
Hsap BLAST neighbor: Q9H1Y0
Species: Homo sapiens

Structure of domain e4gdkB3

Structural contacts of domain e4gdkB3 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4gdkA1 B:x,y,z->A:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e4gdkB4 B:x,y,z->B:X-1,Y,Z Helical domain in autophagy protein 5 Interaction Interface Pymol