Domain ID e4gfhF5

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  • A: alpha bundles
  • X: alpha-helical domain in type II DNA topoisomerase
  • H: alpha-helical domain in type II DNA topoisomerase
  • T: alpha-helical domain in type II DNA topoisomerase
  • F: DNA_topoisoIV
UID: 001710591
Type: Automatic domain
Parent: e1bjtA5
Range: F:989-1070,F:1107-1177
PDB: 4gfh
PDB Description: DNA topoisomerase 2
UniProt: P06786
Hsap BLAST neighbor: Q02880
Species:

Structure of domain e4gfhF5

Domains in the same chain:

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e4gfhF1 F:7-245 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4gfhF4 F:246-406 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4gfhF7 F:419-693 HAD domain-like HAD domain-related Toprim domain
e4gfhF6 F:694-822 HTH HTH winged
e4gfhF3 F:823-988 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4gfhF5 F:989-1070,F:1107-1177 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Domains in the same PDB:

e4gfhA5 A:7-245 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4gfhA3 A:246-408 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4gfhA6 A:419-693 HAD domain-like HAD domain-related Toprim domain
e4gfhA4 A:694-822 HTH HTH winged
e4gfhA2 A:823-988 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4gfhA1 A:989-1070,A:1107-1177 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4gfhF1 F:7-245 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4gfhF4 F:246-406 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4gfhF7 F:419-693 HAD domain-like HAD domain-related Toprim domain
e4gfhF6 F:694-822 HTH HTH winged
e4gfhF3 F:823-988 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4gfhF5 F:989-1070,F:1107-1177 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase

Structural contacts of domain e4gfhF5 of H-group "alpha-helical domain in type II DNA topoisomerase":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1bjtA5 F:x,y,z->A:X,Y,Z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e1bjtA5 F:x,y,z->A:X,Y,Z alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e1bjtA5 F:x,y,z->A:-X-1/2,-Y,Z-1/2 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol
e1bjtA5 F:x,y,z->F:-X-1/2,-Y,Z-1/2 alpha-helical domain in type II DNA topoisomerase Interaction Interface Pymol