ECOD: domain e4iqjC5

Domain ID e4iqjC5

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: tRNA_anti-codon

UID:	001308307
Type:	Automatic domain
Parent:	e2hpiA5
Range:	C:1013-1126
PDB:	4iqj
PDB Description:	DNA polymerase III subunit alpha
UniProt:	Q9XDH5
Species:	Thermus aquaticus

Domains in the same chain:

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Domains in the same PDB:

e4iqjA2	A:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4iqjA1	A:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4iqjA3	A:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e4iqjA4	A:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4iqjA5	A:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4iqjA6	A:1127-1220	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain
e4iqjB2	B:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4iqjB1	B:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4iqjB3	B:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e4iqjB4	B:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4iqjB5	B:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4iqjB6	B:1127-1220	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain
e4iqjC2	C:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4iqjC1	C:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4iqjC3	C:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e4iqjC4	C:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4iqjC5	C:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4iqjC6	C:1127-1220	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain
e4iqjD2	D:5-285	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e4iqjD1	D:286-622	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e4iqjD3	D:623-835	DNA polymerase III finger domain	DNA polymerase III finger domain	DNA polymerase III finger domain
e4iqjD4	D:836-1012	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4iqjD5	D:1013-1126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4iqjD6	D:1127-1220	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain	DNA polymerase III C-terminal domain
e4iqjM1	M:367-456,M:487-543	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau
e4iqjN2	N:367-456,N:490-543	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau
e4iqjO2	O:367-456,O:490-543	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau
e4iqjP2	P:367-459,P:490-543	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau	C-terminal domain of the DNA polymerase III subunit tau

Structural contacts of domain e4iqjC5 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4iqjO2	C:X,Y,Z->O:x,y,z	C-terminal domain of the DNA polymerase III subunit tau	Interaction Interface Pymol
e4iqjC2	C:-X,Y-1/2,-Z+1->C:x,y,z	TIM barrels	Interaction Interface Pymol