Domain ID e4kfiR1

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  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 001065530
Type: Automatic domain
Parent: e1gd8A1
Range: R:2-118
PDB: 4kfi
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e4kfiR1

Domains in the same chain:

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e4kfiR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e4kfi01 0:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4kfi11 1:8-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4kfi21 2:1-62 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4kfi31 3:1-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4kfi41 4:36-65 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4kfi51 5:2-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kfi61 6:9-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4kfi71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4kfi81 8:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4kfiD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4kfiD2 D:127-272 SH3 SH3 SH3
e4kfiF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4kfiG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4kfiH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kfiH2 H:83-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4kfiI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4kfiI2 I:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4kfiK2 K:1-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4kfiK1 K:70-147 HTH HTH Ribosomal protein L11, C-terminal domain
e4kfiN1 N:25-161 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4kfiO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4kfiR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4kfiU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4kfiV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4kfiW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4kfiX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4kfiY1 Y:2-101 SH3 SH3 SH3
e4kfiZ1 Z:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4kfiZ2 Z:93-189 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4kfiR1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4kfi51 R:X,Y,Z->5:x,y,z Rubredoxin-related Interaction Interface Pymol
e4kfi51 R:x,y,z->E:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e4kfiW1 R:X,Y,Z->W:x,y,z Ribosomal protein L22 Interaction Interface Pymol