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RIMD
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Summary
Structure view
Domain organization
Domain ID e4kjcV11
Download files:
FASTA
Coordinates
Conservation
Pymol
domain only
in chain
in PDB
SNVs
A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2
UID:
001207458
Type:
Automatic
domain
Parent:
e1n0uA1
Range:
V:289-411
PDB:
4kjc
PDB Description:
Hsap BLAST neighbor:
Q96RP9
Species:
Domain
In chain context
In PDB context
Structure of domain e4kjcV11
Domains in the same chain:
Download Pymol
e4kjcV9
V:2-290
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e4kjcV11
V:289-411
cradle loop barrel
RIFT-related
Alanine racemase-C
e4kjcV12
V:412-489
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e4kjcV10
V:490-610
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4kjcV2
V:611-700
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
Domains in the same PDB:
e4kjcC2
C:2-106
Alpha-lytic protease prodomain-like
KH-domains
Prokaryotic type KH domain (KH-domain type II)
e4kjcC1
C:107-207
T-fold
Ribosomal protein S3-C
Ribosomal protein S3-C
e4kjcE2
E:10-77
dsRBD-like
dsRNA-binding domain-like
dsRNA-binding domain-like
e4kjcE1
E:78-159
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4kjcF1
F:1-100
Alpha-beta plaits
Ribosomal protein S6
Ribosomal protein S6
e4kjcG1
G:2-152
Ribosomal protein S7
Ribosomal protein S7
Ribosomal protein S7
e4kjcH1
H:2-64
R3H domain-like
Ribosomal protein S8, N-terminal domain
Ribosomal protein S8, N-terminal domain
e4kjcH2
H:65-130
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
e4kjcJ1
J:5-102
Alpha-beta plaits
Ribosomal protein S10
Ribosomal protein S10
e4kjcK1
K:13-129
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e4kjcL1
L:2-124
OB-fold
Nucleic acid-binding proteins
Nucleic acid-binding proteins
e4kjcN1
N:2-101
Glucocorticoid receptor-like
LIM domain-like
LIM domain-like
e4kjcO1
O:2-89
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
e4kjcP1
P:1-82
Ribosomal protein S16
Ribosomal protein S16
Ribosomal protein S16
e4kjcR1
R:20-74
HTH
HTH
tri-helical
e4kjcT1
T:3-87
Spectrin repeat-like
Ribosomal protein S20
Ribosomal protein S20
e4kjcU1
U:4-54
30S ribosomal protein S21
30S ribosomal protein S21
30S ribosomal protein S21
e4kjcV9
V:2-290
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e4kjcV11
V:289-411
cradle loop barrel
RIFT-related
Alanine racemase-C
e4kjcV12
V:412-489
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e4kjcV10
V:490-610
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4kjcV2
V:611-700
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like