ECOD: domain e4nqaB2

Domain ID e4nqaB2

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: zf-C4

UID:	001283298
Type:	Automatic domain
Parent:	e1dszA1
Range:	B:74-200
Ligands:	ZN
PDB:	4nqa
PDB Description:	Liver X nuclear receptor beta
UniProt:	F1D8P7
Hsap BLAST neighbor:	P55055
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4nqaB2	B:74-200	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaB1	B:201-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Domains in the same PDB:

e4nqaA2	A:128-210	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaA1	A:211-456	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaB2	B:74-200	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaB1	B:201-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaH2	H:127-210	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaH1	H:211-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaI1	I:75-200	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaI2	I:201-459	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Structural contacts of domain e4nqaB2 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4nqaA1	B:x,y,z->A:X,Y,Z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaA2	B:x,y,z->A:X,Y,Z	LIM domain-like	Interaction Interface Pymol
e4nqaA2	B:-Y+1,X+1,Z-1/4->A:x,y,z	LIM domain-like	Interaction Interface Pymol
e4nqaI2	B:-Y+1,X+1,Z-1/4->I:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaH1	B:-Y+1,X,Z-1/4->H:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaA1	B:x,y,z->A:-Y+1,X+1,Z-1/4	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaH1	B:-Y+1,X+1,Z-1/4->H:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol