ECOD: domain e4nqaH2

Domain ID e4nqaH2

A: few secondary structure elements
X: Glucocorticoid receptor-like
H: LIM domain-like
T: LIM domain-like
F: zf-C4

UID:	001144933
Type:	Automatic domain
Parent:	e1dszA1
Range:	H:127-210
Ligands:	ZN
PDB:	4nqa
PDB Description:	Retinoic acid receptor RXR-alpha
UniProt:	P19793
Hsap BLAST neighbor:	P19793
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4nqaH2	H:127-210	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaH1	H:211-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Domains in the same PDB:

e4nqaA2	A:128-210	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaA1	A:211-456	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaB2	B:74-200	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaB1	B:201-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaH2	H:127-210	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaH1	H:211-458	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain
e4nqaI1	I:75-200	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4nqaI2	I:201-459	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain	Nuclear receptor ligand-binding domain

Structural contacts of domain e4nqaH2 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4nqaI1	H:X,Y,Z->I:x,y,z	LIM domain-like	Interaction Interface Pymol
e4nqaI2	H:X,Y,Z->I:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaA1	H:x,y,z->A:-Y+1,X,Z-1/4	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaI2	H:-Y,X,Z-1/4->I:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaB1	H:x,y,z->B:X,Y,Z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaH1	H:-Y,X,Z-1/4->H:x,y,z	Nuclear receptor ligand-binding domain	Interaction Interface Pymol
e4nqaI1	H:-Y+1,X,Z-1/4->I:x,y,z	LIM domain-like	Interaction Interface Pymol