Domain ID e4nvuE2

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 001284725
Type: Automatic domain
Parent: e1pkpA1
Range: E:5-72
Ligands: MG
PDB: 4nvu
PDB Description:
Species:

Structure of domain e4nvuE2

Domains in the same chain:

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e4nvuE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4nvuE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4nvuC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4nvuC2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4nvuE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4nvuE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4nvuF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4nvuG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4nvuH1 H:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4nvuH2 H:77-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4nvuJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4nvuK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4nvuL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4nvuN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4nvuO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4nvuP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4nvuR1 R:20-87 HTH HTH tri-helical
e4nvuT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4nvuE2 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4nvuC2 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol