Domain ID e4qcuE2

Download files:
  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 001323915
Type: Automatic domain
Parent: e1pkpA1
Range: E:5-72
Ligands: MG
PDB: 4qcu
PDB Description:
Species:

Structure of domain e4qcuE2

Domains in the same chain:

Download Pymol

e4qcuE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcuE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4qcuC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcuC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcuE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcuE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcuF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcuG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcuH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcuH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcuJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcuK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcuL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcuN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcuO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcuP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcuR1 R:20-87 HTH HTH tri-helical
e4qcuT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcuE2 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcuC1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol