Domain ID e4qcyE2

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  • A: a+b two layers
  • X: dsRBD-like
  • H: dsRNA-binding domain-like
  • T: dsRNA-binding domain-like
  • F: Ribosomal_S5
UID: 001324025
Type: Automatic domain
Parent: e1pkpA1
Range: E:5-72
Ligands: MG
PDB: 4qcy
PDB Description:
Species:

Structure of domain e4qcyE2

Domains in the same chain:

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e4qcyE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcyE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4qcyC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcyC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcyE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcyE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcyF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcyG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcyH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcyH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcyJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcyK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcyL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcyN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcyO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcyP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcyR1 R:20-87 HTH HTH tri-helical
e4qcyT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcyE2 of H-group "dsRNA-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcyC1 E:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol