ECOD: domain e4qiwC3

Domain ID e4qiwC3

A: a+b two layers
X: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
H: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
T: permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
F: Unmapped domains

UID:	001853133
Type:	Automatic domain
Parent:	e3hkzC4
Range:	C:142-224
PDB:	4qiw
PDB Description:	DNA-directed RNA polymerase subunit A''
UniProt:	Q5JE34
Species:

Domains in the same chain:

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e4qiwC2	C:7-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e4qiwC1	C:60-109,C:268-386	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e4qiwC4	C:110-141,C:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4qiwC3	C:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit

Domains in the same PDB:

e4qiwA1	A:6-312	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e4qiwA3	A:313-499	cradle loop barrel	RIFT-related	double psi
e4qiwA4	A:500-666	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e4qiwA2	A:667-898	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e4qiwB2	B:10-172,B:347-485	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4qiwB9	B:173-346	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e4qiwB6	B:485-574	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e4qiwB3	B:574-713	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e4qiwB7	B:714-751,B:877-999	cradle loop barrel	RIFT-related	double psi
e4qiwB8	B:752-876	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e4qiwB5	B:1000-1009,B:1032-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4qiwC2	C:7-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e4qiwC1	C:60-109,C:268-386	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e4qiwC4	C:110-141,C:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4qiwC3	C:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4qiwD2	D:1-37,D:149-188,D:208-258	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e4qiwD1	D:38-148	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e4qiwE2	E:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e4qiwE1	E:79-181	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4qiwF1	F:1-122	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4qiwH1	H:6-81	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e4qiwI1	I:6-312	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e4qiwI3	I:313-499	cradle loop barrel	RIFT-related	double psi
e4qiwI4	I:500-666	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e4qiwI2	I:667-897	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e4qiwJ4	J:10-174,J:347-484	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4qiwJ5	J:173-346	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e4qiwJ1	J:485-574	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e4qiwJ3	J:574-713	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e4qiwJ7	J:714-751,J:877-999	cradle loop barrel	RIFT-related	double psi
e4qiwJ8	J:752-876	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e4qiwJ2	J:1000-1009,J:1032-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4qiwK1	K:2-57	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e4qiwL1	L:1-94	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e4qiwM3	M:7-59	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e4qiwM4	M:60-109,M:268-386	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e4qiwM2	M:110-141,M:225-267	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4qiwM1	M:142-224	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4qiwN1	N:1-63	HTH	RPB10	RPB10
e4qiwO1	O:1-37,O:149-188,O:208-258	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e4qiwO2	O:38-148	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e4qiwP1	P:8-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4qiwQ2	Q:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e4qiwQ1	Q:79-181	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4qiwR1	R:1-122	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e4qiwS1	S:6-81	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e4qiwT1	T:2-57	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e4qiwU1	U:1-94	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e4qiwV1	V:1-63	HTH	RPB10	RPB10
e4qiwW1	W:8-49	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related