Domain ID e4v4rB61

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L33
UID: 001950383
Type: Automatic domain
Parent: e3j9zL21
Range: B6:2-54
PDB: 4v4r
PDB Description: 50S ribosomal protein L33
Hsap BLAST neighbor: O75394
Species: Thermus thermophilus

Structure of domain e4v4rB61

Domains in the same chain:

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e4v4rB61 B6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4v4rAB1 AB:7-127,AB:157-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v4rAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v4rAC1 AC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v4rAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v4rAE2 AE:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v4rAE1 AE:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v4rAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v4rAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v4rAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v4rAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v4rAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v4rAJ1 AJ:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v4rAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v4rAL1 AL:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v4rAM1 AM:2-126 HhH/H2TH H2TH H2TH
e4v4rAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v4rAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v4rAP1 AP:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v4rAQ1 AQ:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v4rAR1 AR:16-88 HTH HTH tri-helical
e4v4rAS1 AS:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v4rAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v4rAY4 AY:289-354 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v4rAY3 AY:8-98 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e4v4rAY1 AY:206-288 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v4rAY2 AY:99-205 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e4v4rB01 B0:2-87 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v4rB21 B2:1-65 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v4rB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v4rB41 B4:1-73 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v4rB51 B5:2-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v4rB61 B6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v4rB71 B7:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v4rB81 B8:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v4rB91 B9:2-36 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v4rBD1 BD:126-237 SH3 SH3 SH3
e4v4rBD2 BD:60-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v4rBE1 BE:38-112,BE:171-320 cradle loop barrel RIFT-related Alanine racemase-C
e4v4rBF1 BF:1-168,BF:193-246 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v4rBG1 BG:10-107,BG:128-156 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v4rBH2 BH:7-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v4rBH1 BH:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v4rBI2 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v4rBI1 BI:54-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v4rBK1 BK:71-140 HTH HTH Ribosomal protein L11, C-terminal domain
e4v4rBK2 BK:8-70 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v4rBN1 BN:4-110,BN:131-141 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v4rBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v4rBP1 BP:51-145 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v4rBQ1 BQ:9-157 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v4rBR1 BR:14-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v4rBS1 BS:9-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v4rBT1 BT:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v4rBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v4rBV1 BV:1-100 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v4rBW1 BW:2-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v4rBX1 BX:1-78 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v4rBY1 BY:1-113 SH3 SH3 SH3
e4v4rBZ2 BZ:1-88 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v4rBZ1 BZ:89-177 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related