Domain ID e4v5eD11

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  • A: few secondary structure elements
  • X: Ribosomal protein bL28-related
  • H: Ribosomal protein bL28-related
  • T: Ribosomal protein L28
  • F: Ribosomal_L28
UID: 001431936
Type: Automatic domain
Parent: e1vw4S1
Range: D1:3-96
Ligands: MG
PDB: 4v5e
PDB Description: 50S RIBOSOMAL PROTEIN L28
UniProt: P60494
Species:

Structure of domain e4v5eD11

Domains in the same chain:

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e4v5eD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Domains in the same PDB:

e4v5eAB1 AB:7-127,AB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5eAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5eAC1 AC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5eAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5eAE1 AE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5eAE2 AE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5eAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5eAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5eAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5eAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5eAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5eAJ1 AJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5eAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5eAL1 AL:5-130 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eAM1 AM:2-122 HhH/H2TH H2TH H2TH
e4v5eAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5eAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5eAP1 AP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5eAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eAR1 AR:19-88 HTH HTH tri-helical
e4v5eAS1 AS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5eAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5eAY4 AY:302-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5eAY1 AY:214-301 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5eAY2 AY:110-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e4v5eAY3 AY:6-109 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e4v5eB01 B0:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5eB11 B1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5eB21 B2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5eB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5eB41 B4:36-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5eB51 B5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5eB61 B6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5eB71 B7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5eB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5eB91 B9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5eBC2 BC:18-67,BC:160-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5eBC1 BC:68-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5eBD1 BD:127-273 SH3 SH3 SH3
e4v5eBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eBE1 BE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5eBF1 BF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5eBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5eBH1 BH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5eBH2 BH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5eBI1 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5eBI2 BI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5eBK1 BK:1-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5eBK2 BK:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5eBN1 BN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5eBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5eBP1 BP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5eBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5eBR1 BR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5eBS1 BS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5eBT1 BT:1-117 SH3 SH3 SH3
e4v5eBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5eBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5eBW1 BW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5eBX1 BX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5eBY1 BY:2-102 SH3 SH3 SH3
e4v5eBZ2 BZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5eBZ1 BZ:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5eCB1 CB:7-127,CB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5eCC1 CC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5eCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5eCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5eCE1 CE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5eCE2 CE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5eCF1 CF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5eCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5eCH1 CH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5eCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5eCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5eCJ1 CJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5eCK1 CK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5eCL1 CL:5-130 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eCM1 CM:2-122 HhH/H2TH H2TH H2TH
e4v5eCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5eCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5eCP1 CP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5eCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eCR1 CR:19-88 HTH HTH tri-helical
e4v5eCS1 CS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5eCT1 CT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5eCY1 CY:214-301 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5eCY3 CY:6-109 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e4v5eCY4 CY:302-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5eCY2 CY:110-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e4v5eD01 D0:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5eD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5eD21 D2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5eD31 D3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5eD41 D4:36-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5eD51 D5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5eD61 D6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5eD71 D7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5eD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5eD91 D9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5eDC1 DC:68-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5eDC2 DC:18-67,DC:160-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5eDD1 DD:127-273 SH3 SH3 SH3
e4v5eDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5eDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5eDF1 DF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5eDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5eDH1 DH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5eDH2 DH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5eDI1 DI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5eDI2 DI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5eDK2 DK:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5eDK1 DK:1-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5eDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5eDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5eDP1 DP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5eDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5eDR1 DR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5eDS1 DS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5eDT1 DT:1-117 SH3 SH3 SH3
e4v5eDU1 DU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5eDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5eDW1 DW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5eDX1 DX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5eDY1 DY:2-102 SH3 SH3 SH3
e4v5eDZ1 DZ:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5eDZ2 DZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like