Domain ID e4v5fDN1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 001432104
Type: Automatic domain
Parent: e4v19N1
Range: DN:1-139
PDB: 4v5f
PDB Description: 50S RIBOSOMAL PROTEIN L13
UniProt: P60488
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e4v5fDN1

Domains in the same chain:

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e4v5fDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e4v5fAB1 AB:7-127,AB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5fAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5fAC1 AC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5fAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5fAE2 AE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fAE1 AE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5fAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5fAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5fAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5fAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5fAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fAJ1 AJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5fAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5fAL1 AL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fAM1 AM:2-126 HhH/H2TH H2TH H2TH
e4v5fAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5fAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5fAP1 AP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5fAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fAR1 AR:19-88 HTH HTH tri-helical
e4v5fAS1 AS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5fAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5fAY1 AY:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4v5fAY3 AY:4-38,AY:67-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4v5fAY5 AY:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e4v5fAY2 AY:586-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4v5fAY4 AY:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fB01 B0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5fB11 B1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5fB21 B2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5fB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5fB41 B4:1-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5fB51 B5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5fB61 B6:5-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5fB71 B7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5fB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5fB91 B9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5fBC1 BC:2-68,BC:161-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5fBC2 BC:69-160 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5fBD1 BD:127-276 SH3 SH3 SH3
e4v5fBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fBE1 BE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5fBF1 BF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5fBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5fBH2 BH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5fBH1 BH:83-178 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5fBK2 BK:70-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5fBK1 BK:2-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5fBN1 BN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5fBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5fBP1 BP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5fBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5fBR1 BR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5fBS1 BS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5fBT1 BT:1-117 SH3 SH3 SH3
e4v5fBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5fBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5fBW1 BW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5fBX1 BX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5fBY1 BY:2-108 SH3 SH3 SH3
e4v5fBZ1 BZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5fBZ2 BZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5fCB1 CB:7-127,CB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5fCC1 CC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5fCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5fCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5fCE1 CE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5fCE2 CE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fCF1 CF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5fCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5fCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5fCH1 CH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5fCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fCJ1 CJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5fCK1 CK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5fCL1 CL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fCM1 CM:2-126 HhH/H2TH H2TH H2TH
e4v5fCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5fCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5fCP1 CP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5fCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fCR1 CR:19-88 HTH HTH tri-helical
e4v5fCS1 CS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5fCT1 CT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5fCY4 CY:476-585 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5fCY5 CY:285-401 cradle loop barrel RIFT-related Alanine racemase-C
e4v5fCY1 CY:402-475 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4v5fCY2 CY:586-690 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e4v5fCY3 CY:4-38,CY:67-284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4v5fD01 D0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5fD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5fD21 D2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5fD31 D3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5fD41 D4:1-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5fD51 D5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5fD61 D6:5-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5fD71 D7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5fD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5fD91 D9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5fDC2 DC:69-160 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5fDC1 DC:2-68,DC:161-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5fDD1 DD:127-276 SH3 SH3 SH3
e4v5fDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5fDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5fDF1 DF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5fDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5fDH2 DH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5fDH1 DH:83-178 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5fDK2 DK:70-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5fDK1 DK:2-69 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5fDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5fDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5fDP1 DP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5fDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5fDR1 DR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5fDS1 DS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5fDT1 DT:1-117 SH3 SH3 SH3
e4v5fDU1 DU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5fDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5fDW1 DW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5fDX1 DX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5fDY1 DY:2-108 SH3 SH3 SH3
e4v5fDZ2 DZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5fDZ1 DZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related