Domain ID e4v5jB01

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 001432549
Type: Automatic domain
Parent: e3j6bR1
Range: B0:3-85
PDB: 4v5j
PDB Description: 50S RIBOSOMAL PROTEIN L27
UniProt: P60493
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e4v5jB01

Domains in the same chain:

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e4v5jB01 B0:3-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e4v5jAB1 AB:7-127,AB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5jAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5jAC1 AC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5jAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5jAE1 AE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5jAE2 AE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5jAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5jAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5jAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5jAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5jAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5jAJ1 AJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5jAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5jAL1 AL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jAM1 AM:2-126 HhH/H2TH H2TH H2TH
e4v5jAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5jAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5jAP1 AP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5jAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jAR1 AR:19-88 HTH HTH tri-helical
e4v5jAS1 AS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5jAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5jAY1 AY:214-300 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5jAY3 AY:301-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5jAY2 AY:6-108 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e4v5jAY4 AY:109-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e4v5jB01 B0:3-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5jB11 B1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5jB21 B2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5jB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5jB41 B4:10-40 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5jB51 B5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5jB61 B6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5jB71 B7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5jB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5jB91 B9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5jBC1 BC:2-57,BC:166-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5jBD1 BD:127-273 SH3 SH3 SH3
e4v5jBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jBE1 BE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5jBF1 BF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5jBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5jBH1 BH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5jBH2 BH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5jBI1 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5jBI2 BI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5jBK1 BK:1-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5jBK2 BK:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5jBN1 BN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5jBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5jBP1 BP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5jBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5jBR1 BR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5jBS1 BS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5jBT1 BT:1-117 SH3 SH3 SH3
e4v5jBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5jBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5jBW1 BW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5jBX1 BX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5jBY1 BY:2-102 SH3 SH3 SH3
e4v5jBZ2 BZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5jBZ1 BZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5jCB1 CB:7-127,CB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5jCC1 CC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5jCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5jCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5jCE1 CE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5jCE2 CE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5jCF1 CF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5jCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5jCH1 CH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5jCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5jCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5jCJ1 CJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5jCK1 CK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5jCL1 CL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jCM1 CM:2-126 HhH/H2TH H2TH H2TH
e4v5jCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5jCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5jCP1 CP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5jCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jCR1 CR:19-88 HTH HTH tri-helical
e4v5jCS1 CS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5jCT1 CT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5jCY1 CY:214-300 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5jCY3 CY:301-356 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e4v5jCY4 CY:109-213 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e4v5jCY2 CY:6-108 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e4v5jD01 D0:3-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5jD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5jD21 D2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5jD31 D3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5jD41 D4:10-40 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5jD51 D5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5jD61 D6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5jD71 D7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5jD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5jD91 D9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5jDC1 DC:2-57,DC:166-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5jDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5jDD1 DD:127-273 SH3 SH3 SH3
e4v5jDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5jDF1 DF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5jDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5jDH1 DH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5jDH2 DH:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5jDI2 DI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5jDI1 DI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5jDK2 DK:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v5jDK1 DK:1-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v5jDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5jDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5jDP1 DP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5jDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5jDR1 DR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5jDS1 DS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5jDT1 DT:1-117 SH3 SH3 SH3
e4v5jDU1 DU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5jDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5jDW1 DW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5jDX1 DX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5jDY1 DY:2-102 SH3 SH3 SH3
e4v5jDZ1 DZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5jDZ2 DZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like