Domain ID e4v5kDE1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 001950578
Type: Automatic domain
Parent: e1vw3C1
Range: DE:1-205
Ligands: MG
PDB: 4v5k
PDB Description: 50S RIBOSOMAL PROTEIN L3
UniProt: Q5SHN8
Hsap BLAST neighbor: P09001
Species:

Structure of domain e4v5kDE1

Domains in the same chain:

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e4v5kDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e4v5kAB1 AB:7-127,AB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5kAC1 AC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5kAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5kAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5kAE1 AE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5kAE2 AE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5kAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5kAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5kAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5kAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5kAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5kAJ1 AJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5kAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5kAL1 AL:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kAM1 AM:2-119 HhH/H2TH H2TH H2TH
e4v5kAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5kAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5kAP1 AP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5kAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kAR1 AR:19-88 HTH HTH tri-helical
e4v5kAS1 AS:4-88 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5kAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5kAY1 AY:0-96 Colicin E3 ribonuclease domain-like Ribonuclease domain of colicin E3 Ribonuclease domain of colicin E3
e4v5kB01 B0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5kB11 B1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5kB21 B2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5kB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5kB41 B4:3-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5kB51 B5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5kB61 B6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5kB71 B7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5kB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5kB91 B9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5kBC2 BC:18-67,BC:160-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5kBC1 BC:68-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5kBD1 BD:127-273 SH3 SH3 SH3
e4v5kBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kBE1 BE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5kBF1 BF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5kBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5kBH1 BH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5kBH2 BH:7-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5kBI2 BI:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5kBI1 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5kBN1 BN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5kBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5kBP1 BP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5kBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5kBR1 BR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5kBS1 BS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5kBT1 BT:1-117 SH3 SH3 SH3
e4v5kBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5kBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5kBW1 BW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5kBX1 BX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5kBY1 BY:2-102 SH3 SH3 SH3
e4v5kBZ2 BZ:2-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5kBZ1 BZ:93-188 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v5kCB1 CB:7-127,CB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v5kCC1 CC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v5kCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v5kCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v5kCE2 CE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5kCE1 CE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v5kCF1 CF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v5kCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v5kCH1 CH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v5kCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v5kCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v5kCJ1 CJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v5kCK1 CK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5kCL1 CL:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kCM1 CM:2-119 HhH/H2TH H2TH H2TH
e4v5kCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v5kCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v5kCP1 CP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v5kCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kCR1 CR:19-88 HTH HTH tri-helical
e4v5kCS1 CS:4-88 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v5kCT1 CT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v5kD01 D0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v5kD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v5kD21 D2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v5kD31 D3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v5kD41 D4:3-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v5kD51 D5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5kD61 D6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v5kD71 D7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v5kD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v5kD91 D9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v5kDC2 DC:18-67,DC:160-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v5kDC1 DC:68-159 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4v5kDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v5kDD1 DD:127-273 SH3 SH3 SH3
e4v5kDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v5kDF1 DF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v5kDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v5kDH1 DH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5kDH2 DH:7-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v5kDI2 DI:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v5kDI1 DI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v5kDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v5kDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v5kDP1 DP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v5kDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v5kDR1 DR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v5kDS1 DS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v5kDT1 DT:1-117 SH3 SH3 SH3
e4v5kDU1 DU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v5kDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v5kDW1 DW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v5kDX1 DX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v5kDY1 DY:2-102 SH3 SH3 SH3
e4v5kDZ2 DZ:2-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v5kDZ1 DZ:93-188 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related