Domain ID e4v8sAX1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Unmapped domains
UID: 001442956
Type: Automatic domain
Parent: e1twfL1
Range: AX:5-48
Ligands: ZN
PDB: 4v8s
PDB Description: DNA-DIRECTED RNA POLYMERASE SUBUNIT P
UniProt: B8YB64
Species:

Structure of domain e4v8sAX1

Domains in the same chain:

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e4v8sAX1 AX:5-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4v8sAI1 AI:11-94 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e4v8sAJ1 AJ:33-81 YqgQ-like YqgQ-like YqgQ-like
e4v8sAM1 AM:1-91 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4v8sAO1 AO:1-65 HTH RPB10 RPB10
e4v8sAR5 AR:576-715 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e4v8sAR4 AR:476-575 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e4v8sAR1 AR:753-875 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4v8sAR7 AR:716-752,AR:876-998 cradle loop barrel RIFT-related double psi
e4v8sAR3 AR:7-170,AR:345-475 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4v8sAR6 AR:999-1125 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4v8sAR2 AR:171-344 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e4v8sAS1 AS:2-36,AS:159-263 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4v8sAS2 AS:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e4v8sAT1 AT:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e4v8sAT2 AT:79-178 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8sAU1 AU:3-107 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4v8sAV1 AV:5-117 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8sAW2 AW:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4v8sAW1 AW:3-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4v8sAW3 AW:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4v8sAW4 AW:307-494 cradle loop barrel RIFT-related double psi
e4v8sAX1 AX:5-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8sAY1 AY:116-147,AY:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4v8sAY3 AY:66-115,AY:276-394 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4v8sAY4 AY:6-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e4v8sAY2 AY:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4v8sAZ1 AZ:8-83 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e4v8sBA3 BA:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e4v8sBA1 BA:3-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e4v8sBA2 BA:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e4v8sBA4 BA:307-494 cradle loop barrel RIFT-related double psi
e4v8sBB4 BB:476-575 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e4v8sBB1 BB:999-1125 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4v8sBB3 BB:7-170,BB:345-475 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e4v8sBB2 BB:753-875 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4v8sBB7 BB:171-344 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e4v8sBB5 BB:576-715 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e4v8sBB6 BB:716-752,BB:876-998 cradle loop barrel RIFT-related double psi
e4v8sBC3 BC:6-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e4v8sBC1 BC:116-147,BC:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4v8sBC2 BC:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e4v8sBC4 BC:66-115,BC:276-394 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e4v8sBD1 BD:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e4v8sBD2 BD:2-36,BD:159-263 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4v8sBE1 BE:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e4v8sBE2 BE:79-178 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8sBF1 BF:3-107 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e4v8sBG1 BG:5-117 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8sBH1 BH:8-83 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e4v8sBK1 BK:11-94 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e4v8sBL1 BL:1-91 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e4v8sBN1 BN:1-65 HTH RPB10 RPB10
e4v8sBP1 BP:5-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8sBQ1 BQ:32-81 YqgQ-like YqgQ-like YqgQ-like