Domain ID e4v8xDN1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 001443378
Type: Automatic domain
Parent: e4v19N1
Range: DN:1-139
Ligands: MG
PDB: 4v8x
PDB Description: 50S RIBOSOMAL PROTEIN L13
UniProt: P60488
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e4v8xDN1

Domains in the same chain:

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e4v8xDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e4v8xAB1 AB:7-127,AB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v8xAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v8xAC1 AC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v8xAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v8xAE2 AE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v8xAE1 AE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v8xAF1 AF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v8xAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v8xAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v8xAH1 AH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v8xAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v8xAJ1 AJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v8xAK1 AK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v8xAL1 AL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xAM1 AM:2-120 HhH/H2TH H2TH H2TH
e4v8xAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v8xAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v8xAP1 AP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v8xAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xAR1 AR:19-88 HTH HTH tri-helical
e4v8xAS1 AS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v8xAT1 AT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v8xAY1 AY:1-84 RelE-like RelE-like RelE-like
e4v8xAZ1 AZ:101-184 RelE-like RelE-like RelE-like
e4v8xB01 B0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v8xB11 B1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v8xB21 B2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v8xB31 B3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v8xB41 B4:1-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v8xB51 B5:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8xB61 B6:5-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8xB71 B7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v8xB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v8xB91 B9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v8xBC1 BC:2-57,BC:166-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v8xBD1 BD:127-273 SH3 SH3 SH3
e4v8xBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xBE1 BE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v8xBF1 BF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v8xBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v8xBH1 BH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v8xBH2 BH:7-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v8xBI1 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v8xBI2 BI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v8xBN1 BN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v8xBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v8xBP1 BP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v8xBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v8xBR1 BR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v8xBS1 BS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v8xBT1 BT:1-136 SH3 SH3 SH3
e4v8xBU1 BU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v8xBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v8xBW1 BW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v8xBX1 BX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v8xBY1 BY:2-102 SH3 SH3 SH3
e4v8xBZ2 BZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v8xBZ1 BZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v8xCB1 CB:7-127,CB:157-241 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v8xCC1 CC:107-208 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v8xCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v8xCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v8xCE2 CE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v8xCE1 CE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v8xCF1 CF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v8xCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v8xCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v8xCH1 CH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v8xCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v8xCJ1 CJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v8xCK1 CK:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v8xCL1 CL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xCM1 CM:2-120 HhH/H2TH H2TH H2TH
e4v8xCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v8xCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v8xCP1 CP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v8xCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xCR1 CR:19-88 HTH HTH tri-helical
e4v8xCS1 CS:4-82 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v8xCT1 CT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v8xCY1 CY:1-84 RelE-like RelE-like RelE-like
e4v8xCZ1 CZ:1-84 RelE-like RelE-like RelE-like
e4v8xD01 D0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v8xD11 D1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v8xD21 D2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v8xD31 D3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v8xD41 D4:1-58 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v8xD51 D5:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8xD61 D6:5-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v8xD71 D7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v8xD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v8xD91 D9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v8xDC1 DC:2-57,DC:166-229 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4v8xDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v8xDD1 DD:127-273 SH3 SH3 SH3
e4v8xDE1 DE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4v8xDF1 DF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v8xDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v8xDH1 DH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v8xDH2 DH:7-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v8xDI2 DI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v8xDI1 DI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v8xDN1 DN:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v8xDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v8xDP1 DP:5-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v8xDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v8xDR1 DR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v8xDS1 DS:11-109 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v8xDT1 DT:1-136 SH3 SH3 SH3
e4v8xDU1 DU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v8xDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v8xDW1 DW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v8xDX1 DX:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v8xDY1 DY:2-102 SH3 SH3 SH3
e4v8xDZ2 DZ:3-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v8xDZ1 DZ:93-187 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related