Domain ID e4v9rDF1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 001446902
Type: Automatic domain
Parent: e1dmgA1
Range: DF:6-208
Ligands: MG
PDB: 4v9r
PDB Description: 50S Ribosomal Protein L4
UniProt: Q5SHN9
Hsap BLAST neighbor: Q9BYD3
Species: Thermus thermophilus

Structure of domain e4v9rDF1

Domains in the same chain:

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e4v9rDF1 DF:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e4v9rAB1 AB:7-127,AB:157-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v9rAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v9rAC1 AC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v9rAD1 AD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v9rAE1 AE:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v9rAE2 AE:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v9rAF1 AF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v9rAG1 AG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v9rAH2 AH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v9rAH1 AH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v9rAI1 AI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v9rAJ1 AJ:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v9rAK1 AK:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v9rAL1 AL:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rAM1 AM:2-124 HhH/H2TH H2TH H2TH
e4v9rAN1 AN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v9rAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v9rAP1 AP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v9rAQ1 AQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rAR1 AR:20-87 HTH HTH tri-helical
e4v9rAS1 AS:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v9rAT1 AT:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v9rB01 B0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v9rB11 B1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v9rB21 B2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v9rB31 B3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v9rB41 B4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v9rB51 B5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v9rB61 B6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v9rB71 B7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v9rB81 B8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v9rB91 B9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v9rBD2 BD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rBD1 BD:127-276 SH3 SH3 SH3
e4v9rBE1 BE:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e4v9rBF1 BF:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v9rBG1 BG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v9rBH2 BH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v9rBH1 BH:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v9rBI1 BI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v9rBI2 BI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v9rBN1 BN:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v9rBO1 BO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v9rBP1 BP:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v9rBQ1 BQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v9rBR1 BR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v9rBS1 BS:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v9rBT1 BT:1-131 SH3 SH3 SH3
e4v9rBU1 BU:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v9rBV1 BV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v9rBW1 BW:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v9rBX1 BX:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v9rBY1 BY:1-107 SH3 SH3 SH3
e4v9rBZ2 BZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v9rBZ1 BZ:93-171 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4v9rCB1 CB:7-127,CB:157-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v9rCC1 CC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v9rCC2 CC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v9rCD1 CD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v9rCE1 CE:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v9rCE2 CE:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v9rCF1 CF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v9rCG1 CG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v9rCH2 CH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v9rCH1 CH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v9rCI1 CI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v9rCJ1 CJ:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v9rCK1 CK:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v9rCL1 CL:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rCM1 CM:3-124 HhH/H2TH H2TH H2TH
e4v9rCN1 CN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v9rCO1 CO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v9rCP1 CP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v9rCQ1 CQ:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rCR1 CR:20-87 HTH HTH tri-helical
e4v9rCS1 CS:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v9rCT1 CT:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v9rD01 D0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v9rD11 D1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v9rD21 D2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v9rD31 D3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v9rD41 D4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4v9rD51 D5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v9rD61 D6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v9rD71 D7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v9rD81 D8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v9rD91 D9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v9rDD2 DD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v9rDD1 DD:127-276 SH3 SH3 SH3
e4v9rDE1 DE:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e4v9rDF1 DF:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v9rDG1 DG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v9rDH1 DH:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v9rDH2 DH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v9rDI2 DI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v9rDI1 DI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v9rDN1 DN:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v9rDO1 DO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v9rDP1 DP:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v9rDQ1 DQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v9rDR1 DR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v9rDS1 DS:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v9rDT1 DT:1-131 SH3 SH3 SH3
e4v9rDU1 DU:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v9rDV1 DV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v9rDW1 DW:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v9rDX1 DX:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v9rDY1 DY:1-107 SH3 SH3 SH3
e4v9rDZ2 DZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v9rDZ1 DZ:93-174 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related