ECOD: domain e4wpoAF1

Domain ID e4wpoAF1

A: a/b three-layered sandwiches
X: Ribosomal protein L4
H: Ribosomal protein L4
T: Ribosomal protein L4
F: Ribosomal_L4

UID:	001492507
Type:	Automatic domain
Parent:	e1vqoC1
Range:	AF:6-208
Ligands:	MG
PDB:	4wpo
PDB Description:	50S ribosomal protein L4
UniProt:	Q5SHN9
Hsap BLAST neighbor:	Q9BYD3
Species:

Domains in the same chain:

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e4wpoAF1	AF:6-208	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4

Domains in the same PDB:

e4wpoA01	A0:2-84	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4wpoA11	A1:2-98	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e4wpoA21	A2:1-70	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4wpoA31	A3:2-60	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4wpoA41	A4:1-69	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e4wpoA51	A5:2-60	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4wpoA61	A6:2-54	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4wpoA71	A7:1-48	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4wpoA81	A8:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4wpoA91	A9:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4wpoAC1	AC:4-68,AC:160-227	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e4wpoAD2	AD:127-276	SH3	SH3	SH3
e4wpoAD1	AD:2-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoAE1	AE:1-204	cradle loop barrel	RIFT-related	Alanine racemase-C
e4wpoAF1	AF:6-208	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4wpoAG1	AG:2-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4wpoAH1	AH:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4wpoAH2	AH:83-175	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4wpoAK1	AK:4-133	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e4wpoAL1	AL:75-140	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4wpoAN1	AN:1-140	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4wpoAO1	AO:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4wpoAP1	AP:1-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4wpoAQ1	AQ:1-141	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4wpoAR1	AR:1-118	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4wpoAS1	AS:3-112	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4wpoAT1	AT:1-131	SH3	SH3	SH3
e4wpoAU1	AU:2-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4wpoAV1	AV:1-101	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4wpoAW1	AW:1-112	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4wpoAX1	AX:1-95	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4wpoAY1	AY:1-107	SH3	SH3	SH3
e4wpoAZ2	AZ:93-171	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related
e4wpoAZ1	AZ:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4wpoBB1	BB:7-127,BB:157-237	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4wpoBC2	BC:2-106	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4wpoBC1	BC:107-207	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4wpoBD1	BD:2-209	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4wpoBE1	BE:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4wpoBE2	BE:73-152	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoBF1	BF:1-100	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4wpoBG1	BG:2-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4wpoBH2	BH:2-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4wpoBH1	BH:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4wpoBI1	BI:2-128	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoBJ1	BJ:4-100	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4wpoBK1	BK:13-126	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4wpoBL1	BL:5-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoBM1	BM:2-124	HhH/H2TH	H2TH	H2TH
e4wpoBN1	BN:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4wpoBO1	BO:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4wpoBP1	BP:1-82	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4wpoBQ1	BQ:2-78	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoBR1	BR:20-87	HTH	HTH	tri-helical
e4wpoBS1	BS:2-85	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4wpoBT1	BT:8-103	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e4wpoBZ2	BZ:283-404	cradle loop barrel	RIFT-related	Alanine racemase-C
e4wpoBZ3	BZ:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4wpoBZ4	BZ:483-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoBZ5	BZ:405-482	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4wpoBZ1	BZ:9-38,BZ:67-284	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4wpoBZ6	BZ:-66--14	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e4wpoC01	C0:2-84	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4wpoC11	C1:2-98	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e4wpoC21	C2:1-70	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4wpoC31	C3:2-60	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4wpoC41	C4:1-69	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e4wpoC51	C5:2-60	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4wpoC61	C6:2-54	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4wpoC71	C7:1-48	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4wpoC81	C8:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4wpoC91	C9:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4wpoCC1	CC:4-68,CC:160-227	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e4wpoCD2	CD:127-276	SH3	SH3	SH3
e4wpoCD1	CD:2-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoCE1	CE:1-204	cradle loop barrel	RIFT-related	Alanine racemase-C
e4wpoCF1	CF:6-208	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4wpoCG1	CG:2-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4wpoCH2	CH:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4wpoCH1	CH:83-175	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4wpoCK1	CK:4-133	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e4wpoCL1	CL:75-140	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4wpoCN1	CN:1-140	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4wpoCO1	CO:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4wpoCP1	CP:1-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4wpoCQ1	CQ:1-141	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4wpoCR1	CR:1-118	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4wpoCS1	CS:3-112	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4wpoCT1	CT:1-131	SH3	SH3	SH3
e4wpoCU1	CU:2-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4wpoCV1	CV:1-101	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4wpoCW1	CW:1-112	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4wpoCX1	CX:1-95	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4wpoCY1	CY:1-107	SH3	SH3	SH3
e4wpoCZ2	CZ:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4wpoCZ1	CZ:93-174	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related
e4wpoDB1	DB:7-127,DB:157-237	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4wpoDC1	DC:107-207	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4wpoDC2	DC:2-106	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4wpoDD1	DD:2-209	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4wpoDE1	DE:73-152	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoDE2	DE:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4wpoDF1	DF:1-100	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4wpoDG1	DG:2-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4wpoDH2	DH:2-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4wpoDH1	DH:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4wpoDI1	DI:2-128	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoDJ1	DJ:5-100	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4wpoDK1	DK:13-126	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4wpoDL1	DL:5-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoDM1	DM:3-124	HhH/H2TH	H2TH	H2TH
e4wpoDN1	DN:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4wpoDO1	DO:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4wpoDP1	DP:1-82	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4wpoDQ1	DQ:2-78	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4wpoDR1	DR:20-87	HTH	HTH	tri-helical
e4wpoDS1	DS:2-84	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4wpoDT1	DT:8-103	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e4wpoDZ3	DZ:483-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4wpoDZ2	DZ:283-403	cradle loop barrel	RIFT-related	Alanine racemase-C
e4wpoDZ1	DZ:8-40,DZ:67-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4wpoDZ6	DZ:-66--17	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e4wpoDZ5	DZ:600-689	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4wpoDZ4	DZ:404-482	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like