Domain ID e4y4o1D2

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosomal_L2
UID: 001513183
Type: Automatic domain
Parent: e1rl2A1
Range: 1D:2-126
Ligands: ARG MG
PDB: 4y4o
PDB Description: 50S ribosomal protein L2
UniProt: P60405
Hsap BLAST neighbor: Q5T653
Species:

Structure of domain e4y4o1D2

Domains in the same chain:

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e4y4o1D1 1D:127-276 SH3 SH3 SH3
e4y4o1D2 1D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4y4o101 10:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4y4o111 11:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4y4o121 12:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4y4o131 13:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4y4o141 14:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4y4o151 15:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4y4o161 16:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4y4o171 17:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4y4o181 18:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4y4o191 19:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4y4o1b1 1b:7-127,1b:157-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4y4o1c2 1c:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4y4o1c1 1c:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4y4o1d1 1d:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4y4o1D2 1D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o1D1 1D:127-276 SH3 SH3 SH3
e4y4o1e1 1e:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4y4o1e2 1e:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4y4o1E1 1E:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e4y4o1f1 1f:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4y4o1F1 1F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4y4o1g1 1g:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4y4o1G1 1G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4y4o1h2 1h:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4y4o1h1 1h:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4y4o1H1 1H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4y4o1H2 1H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4y4o1i1 1i:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4y4o1I2 1I:56-147 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4y4o1I1 1I:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4y4o1j1 1j:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4y4o1k1 1k:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4y4o1l1 1l:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o1m1 1m:2-117 HhH/H2TH H2TH H2TH
e4y4o1n1 1n:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4y4o1N1 1N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4y4o1o1 1o:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4y4o1O1 1O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4y4o1p1 1p:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4y4o1P1 1P:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4y4o1q1 1q:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o1Q1 1Q:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4y4o1r1 1r:20-87 HTH HTH tri-helical
e4y4o1R1 1R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4y4o1s1 1s:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4y4o1S1 1S:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4y4o1t1 1t:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4y4o1T1 1T:1-131 SH3 SH3 SH3
e4y4o1U1 1U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4y4o1V1 1V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4y4o1W1 1W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4y4o1X1 1X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4y4o1y1 1y:2-98 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)
e4y4o1Y1 1Y:1-107 SH3 SH3 SH3
e4y4o1Z2 1Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4y4o1Z1 1Z:93-203 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4y4o201 20:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4y4o211 21:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4y4o221 22:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4y4o231 23:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4y4o241 24:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4y4o251 25:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4y4o261 26:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4y4o271 27:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4y4o281 28:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4y4o291 29:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4y4o2b1 2b:7-127,2b:157-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4y4o2c1 2c:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4y4o2c2 2c:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4y4o2d1 2d:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4y4o2D2 2D:128-276 SH3 SH3 SH3
e4y4o2D1 2D:2-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o2e2 2e:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4y4o2e1 2e:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4y4o2E1 2E:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e4y4o2f1 2f:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4y4o2F1 2F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4y4o2g1 2g:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4y4o2G1 2G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4y4o2h2 2h:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4y4o2h1 2h:77-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4y4o2H2 2H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4y4o2H1 2H:3-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4y4o2i1 2i:2-127 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4y4o2I2 2I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4y4o2I1 2I:53-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4y4o2j1 2j:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4y4o2k1 2k:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4y4o2l1 2l:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o2m1 2m:3-116 HhH/H2TH H2TH H2TH
e4y4o2n1 2n:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4y4o2N1 2N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4y4o2o1 2o:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4y4o2O1 2O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4y4o2p1 2p:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4y4o2P1 2P:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4y4o2q1 2q:2-78 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4y4o2Q1 2Q:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4y4o2r1 2r:20-87 HTH HTH tri-helical
e4y4o2R1 2R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4y4o2s1 2s:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4y4o2S1 2S:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4y4o2t1 2t:6-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4y4o2T1 2T:1-131 SH3 SH3 SH3
e4y4o2U1 2U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4y4o2V1 2V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4y4o2W1 2W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4y4o2X1 2X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4y4o2y1 2y:3-98 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)
e4y4o2Y1 2Y:1-107 SH3 SH3 SH3
e4y4o2Z1 2Z:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4y4o2Z2 2Z:94-201 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related