Domain ID e4ypbYD2

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  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: Ribosomal_L2_C
UID: 001695705
Type: Automatic domain
Parent: e2zjqA2
Range: YD:127-273
Ligands: MG
PDB: 4ypb
PDB Description: 50S ribosomal protein L2
UniProt: P60405
Hsap BLAST neighbor: Q5T653
Species:

Structure of domain e4ypbYD2

Domains in the same chain:

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e4ypbYD2 YD:127-273 SH3 SH3 SH3
e4ypbYD1 YD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4ypbQB1 QB:5-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4ypbQC2 QC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4ypbQC1 QC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4ypbQD1 QD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ypbQE2 QE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ypbQE1 QE:2-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4ypbQF1 QF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4ypbQG1 QG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4ypbQH2 QH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4ypbQH1 QH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4ypbQI1 QI:1-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ypbQJ1 QJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4ypbQK1 QK:9-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ypbQL1 QL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbQM1 QM:2-119 HhH/H2TH H2TH H2TH
e4ypbQN1 QN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ypbQO1 QO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4ypbQP1 QP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4ypbQQ1 QQ:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbQR1 QR:18-88 HTH HTH tri-helical
e4ypbQS1 QS:4-85 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4ypbQT1 QT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4ypbQY1 QY:1-91 RelE-like RelE-like RelE-like
e4ypbR01 R0:3-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ypbR11 R1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ypbR21 R2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ypbR31 R3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ypbR41 R4:2-71 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4ypbR51 R5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ypbR61 R6:6-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ypbR71 R7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ypbR81 R8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ypbR91 R9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ypbRD2 RD:127-273 SH3 SH3 SH3
e4ypbRD1 RD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbRE1 RE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4ypbRF1 RF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ypbRG1 RG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ypbRH1 RH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ypbRH2 RH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ypbRI2 RI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ypbRI1 RI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ypbRN1 RN:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ypbRO1 RO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ypbRP1 RP:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ypbRQ1 RQ:1-140 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4ypbRR1 RR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ypbRS1 RS:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ypbRT1 RT:1-137 SH3 SH3 SH3
e4ypbRU1 RU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ypbRV1 RV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ypbRW1 RW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ypbRX1 RX:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ypbRY1 RY:2-103 SH3 SH3 SH3
e4ypbRZ2 RZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ypbRZ1 RZ:93-176 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4ypbXB1 XB:5-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4ypbXC2 XC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4ypbXC1 XC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4ypbXD1 XD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ypbXE1 XE:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ypbXE2 XE:2-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4ypbXF1 XF:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4ypbXG1 XG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4ypbXH2 XH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4ypbXH1 XH:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4ypbXI1 XI:1-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ypbXJ1 XJ:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4ypbXK1 XK:9-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ypbXL1 XL:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbXM1 XM:2-119 HhH/H2TH H2TH H2TH
e4ypbXN1 XN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ypbXO1 XO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4ypbXP1 XP:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4ypbXQ1 XQ:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbXR1 XR:18-88 HTH HTH tri-helical
e4ypbXS1 XS:4-85 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4ypbXT1 XT:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4ypbXY1 XY:1-91 RelE-like RelE-like RelE-like
e4ypbY01 Y0:3-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ypbY11 Y1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ypbY21 Y2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ypbY31 Y3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ypbY41 Y4:2-71 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4ypbY51 Y5:2-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ypbY61 Y6:6-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ypbY71 Y7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ypbY81 Y8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ypbY91 Y9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ypbYD2 YD:127-273 SH3 SH3 SH3
e4ypbYD1 YD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ypbYE1 YE:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e4ypbYF1 YF:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ypbYG1 YG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ypbYH1 YH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ypbYH2 YH:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ypbYI1 YI:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ypbYI2 YI:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ypbYN1 YN:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ypbYO1 YO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ypbYP1 YP:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ypbYQ1 YQ:1-139 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4ypbYR1 YR:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ypbYS1 YS:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ypbYT1 YT:1-137 SH3 SH3 SH3
e4ypbYU1 YU:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ypbYV1 YV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ypbYW1 YW:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ypbYX1 YX:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ypbYY1 YY:2-103 SH3 SH3 SH3
e4ypbYZ2 YZ:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e4ypbYZ1 YZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like