Domain ID e5czpYD1

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  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: Ribosomal_L2_C
UID: 001890699
Type: Automatic domain
Parent: e2zjqA2
Range: YD:127-276
Ligands: MG
PDB: 5czp
PDB Description: 50S ribosomal protein L2
UniProt: P60405
Hsap BLAST neighbor: Q5T653
Species:

Structure of domain e5czpYD1

Domains in the same chain:

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e5czpYD1 YD:127-276 SH3 SH3 SH3
e5czpYD2 YD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e5czpB1 XB:7-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5czpQB1 QB:7-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5czpQC2 QC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5czpQC1 QC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5czpQD1 QD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5czpQE1 QE:74-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5czpQE2 QE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5czpQF1 QF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5czpQG1 QG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5czpQH2 QH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5czpQH1 QH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5czpQI1 QI:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5czpQJ1 QJ:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5czpQK1 QK:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5czpQL1 QL:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpQM1 QM:2-117 HhH/H2TH H2TH H2TH
e5czpQN1 QN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5czpQO1 QO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5czpQP1 QP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5czpQQ1 QQ:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpQR1 QR:20-87 HTH HTH tri-helical
e5czpQS1 QS:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5czpQT1 QT:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5czpQY1 QY:226-312 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e5czpQY4 QY:313-362 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e5czpQY3 QY:6-120 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e5czpQY2 QY:121-225 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e5czpR01 R0:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5czpR11 R1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5czpR21 R2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5czpR31 R3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5czpR41 R4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5czpR51 R5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5czpR61 R6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5czpR71 R7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5czpR81 R8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5czpR91 R9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5czpRD2 RD:127-276 SH3 SH3 SH3
e5czpRD1 RD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpRE1 RE:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e5czpRF1 RF:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5czpRG1 RG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5czpRH2 RH:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5czpRH1 RH:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5czpRI2 RI:56-147 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5czpRI1 RI:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5czpRN1 RN:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5czpRO1 RO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5czpRP1 RP:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5czpRQ1 RQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5czpRR1 RR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5czpRS1 RS:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5czpRT1 RT:1-131 SH3 SH3 SH3
e5czpRU1 RU:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5czpRV1 RV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5czpRW1 RW:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5czpRX1 RX:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5czpRY1 RY:1-107 SH3 SH3 SH3
e5czpRZ1 RZ:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5czpRZ2 RZ:93-203 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5czpXB1 XB:7-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5czpXC2 XC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5czpXC1 XC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5czpXD1 XD:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5czpXE2 XE:74-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5czpXE1 XE:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5czpXF1 XF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5czpXG1 XG:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5czpXH2 XH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5czpXH1 XH:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5czpXI1 XI:2-127 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5czpXJ1 XJ:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5czpXK1 XK:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5czpXL1 XL:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpXM1 XM:3-116 HhH/H2TH H2TH H2TH
e5czpXN1 XN:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5czpXO1 XO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5czpXP1 XP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5czpXQ1 XQ:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpXR1 XR:20-87 HTH HTH tri-helical
e5czpXS1 XS:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5czpXT1 XT:6-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5czpXY2 XY:226-312 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e5czpXY3 XY:6-120 Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain Release factor (Pfam 00472) N-terminal alpha helical domain
e5czpXY1 XY:121-225 Alpha-beta plaits Ferredoxin-like domain in release factor Ferredoxin-like domain in release factor
e5czpXY4 XY:313-362 dsRBD-like Peptidyl-tRNA hydrolase domain-like Peptidyl-tRNA hydrolase domain-like
e5czpY01 Y0:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5czpY11 Y1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5czpY21 Y2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5czpY31 Y3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5czpY41 Y4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5czpY51 Y5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5czpY61 Y6:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5czpY71 Y7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5czpY81 Y8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5czpY91 Y9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5czpYD2 YD:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5czpYD1 YD:127-276 SH3 SH3 SH3
e5czpYE1 YE:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e5czpYF1 YF:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5czpYG1 YG:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5czpYH1 YH:3-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5czpYH2 YH:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5czpYI1 YI:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5czpYI2 YI:56-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5czpYN1 YN:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5czpYO1 YO:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5czpYP1 YP:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5czpYQ1 YQ:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5czpYR1 YR:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5czpYS1 YS:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5czpYT1 YT:1-131 SH3 SH3 SH3
e5czpYU1 YU:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5czpYV1 YV:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5czpYW1 YW:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5czpYX1 YX:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5czpYY1 YY:1-107 SH3 SH3 SH3
e5czpYZ1 YZ:94-201 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5czpYZ2 YZ:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like