ECOD: domain e5dgeS61

Domain ID e5dgeS61

A: beta barrels
X: Ribosomal protein L25-like
H: Ribosomal protein L25-like
T: Ribosomal protein L25-like
F: Ribosomal_S6e

UID:	001949319
Type:	Automatic domain
Parent:	e2xzmY1
Range:	S6:1-226
Ligands:	OHX PRO
PDB:	5dge
PDB Description:	40S ribosomal protein S6-A
UniProt:	P0CX37
Hsap BLAST neighbor:	P62753
Species:

Domain
In chain context
In PDB context

Structure of domain e5dgeS61

Domains in the same chain:

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e5dgeS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like

Domains in the same PDB:

e5dgec01	c0:1-98	HTH	HTH	winged
e5dgeC01	C0:1-96	HTH	HTH	winged
e5dgec11	c1:2-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgeC11	C1:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgec21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgeC21	C2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgec32	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5dgec31	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5dgeC32	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5dgeC31	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5dgec41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5dgeC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5dgec51	c5:4-138	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5dgeC51	C5:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5dgec61	c6:2-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5dgeC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5dgec71	c7:2-122	HTH	HTH	FF domain
e5dgeC71	C7:2-126	HTH	HTH	FF domain
e5dgec81	c8:2-146	HhH/H2TH	H2TH	H2TH
e5dgeC81	C8:2-146	HhH/H2TH	H2TH	H2TH
e5dgec91	c9:2-144	HTH	HTH	winged
e5dgeC91	C9:2-144	HTH	HTH	winged
e5dged01	d0:12-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5dgeD01	D0:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5dged11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5dgeD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5dged21	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5dged22	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5dgeD21	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5dgeD22	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5dged31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgeD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dged41	d4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dgeD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dged51	d5:37-105	HTH	HTH	winged
e5dgeD51	D5:36-105	HTH	HTH	winged
e5dged61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dgeD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dged71	d7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeD71	D7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dged81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgeD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dged91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dgeD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dgee01	e0:2-63	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5dgeE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5dgee11	e1:77-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgef1	f:10-84	SH3	SH3	SH3
e5dgef2	f:85-157	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgel22	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgel21	l2:99-253	SH3	SH3	SH3
e5dgeL21	L2:99-253	SH3	SH3	SH3
e5dgeL22	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgel31	l3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5dgeL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5dgel42	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5dgel41	l4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5dgeL41	L4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5dgeL42	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5dgel51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5dgeL51	L5:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5dgel61	l6:2-176	SH3	SH3	SH3
e5dgeL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e5dgel71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5dgeL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5dgel81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgeL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgel92	l9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5dgel91	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5dgeL92	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5dgeL91	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5dgem01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5dgeM01	M0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5dgem11	m1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5dgeM11	M1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5dgem22	m2:9-87	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e5dgem21	m2:88-163	HTH	HTH	Ribosomal protein L11, C-terminal domain
e5dgem31	m3:2-195	RPL13	RPL13	RPL13
e5dgeM31	M3:2-194	RPL13	RPL13	RPL13
e5dgem41	m4:2-138	SH3	SH3	SH3
e5dgeM41	M4:3-138	SH3	SH3	SH3
e5dgem51	m5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dgeM51	M5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dgem61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5dgeM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5dgem71	m7:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5dgeM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5dgem81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5dgeM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5dgem92	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5dgem91	m9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5dgeM91	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5dgeM92	M9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5dgen02	n0:1-69	GP2-like	RplX-like	RplX-like
e5dgen01	n0:70-172	GP2-like	RplX-like	RplX-like
e5dgeN02	N0:70-172	GP2-like	RplX-like	RplX-like
e5dgeN01	N0:1-69	GP2-like	RplX-like	RplX-like
e5dgen11	n1:2-160	SH3	SH3	SH3
e5dgeN11	N1:2-160	SH3	SH3	SH3
e5dgen21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5dgeN21	N2:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5dgen31	n3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5dgeN31	N3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5dgen41	n4:1-135	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dgeN41	N4:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5dgen51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dgeN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5dgen61	n6:2-127	SH3	SH3	SH3
e5dgeN61	N6:2-127	SH3	SH3	SH3
e5dgen71	n7:2-136	SH3	SH3	SH3
e5dgeN71	N7:2-136	SH3	SH3	SH3
e5dgen81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5dgeN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5dgen91	n9:2-59	RPL29	RPL29	RPL29
e5dgeN91	N9:2-59	RPL29	RPL29	RPL29
e5dgeo01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgeO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5dgeo11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5dgeO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5dgeo21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5dgeO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5dgeo31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5dgeO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5dgeo41	o4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5dgeO41	O4:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5dgeo51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5dgeO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5dgeo61	o6:2-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5dgeO61	O6:2-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5dgeo71	o7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeO71	O7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeo81	o8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5dgeO81	O8:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5dgeo91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5dgeO91	O9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5dgep01	p0:3-107,p0:184-221	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e5dgep11	p1:1-47	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2
e5dgep21	p2:1-46	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2
e5dgeq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5dgeQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5dgeq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dgeQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5dges01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5dgeS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5dges12	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5dges11	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5dgeS11	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5dgeS12	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5dges23	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5dges21	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5dges22	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5dgeS22	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5dgeS23	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5dgeS21	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5dges31	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5dges32	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5dgeS31	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5dgeS32	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5dges43	s4:176-261	SH3	SH3	SH3
e5dges41	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5dges42	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgeS43	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5dgeS42	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5dgeS41	S4:176-261	SH3	SH3	SH3
e5dges51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5dgeS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5dges61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5dgeS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5dges72	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5dges71	s7:2-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5dgeS72	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5dgeS71	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5dges81	s8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5dgeS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5dges91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5dgeS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5dgesM1	sM:23-85,sM:119-174	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5dgeSM1	SM:9-176	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e5dgesR1	sR:2-319	beta-propeller-like	beta-propeller	7-bladed
e5dgeSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed