Domain ID e5dged81

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosomal_S28e
UID: 001949370
Type: Automatic domain
Parent: e1ny4A1
Range: d8:5-67
PDB: 5dge
PDB Description: 40S ribosomal protein S28-A
UniProt: Q3E7X9
Hsap BLAST neighbor: P62857
Species:

Structure of domain e5dged81

Domains in the same chain:

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e5dged81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e5dgec01 c0:1-98 HTH HTH winged
e5dgeC01 C0:1-96 HTH HTH winged
e5dgec11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgeC11 C1:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgec21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgeC21 C2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgec32 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5dgec31 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5dgeC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5dgeC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5dgec41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5dgeC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5dgec51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5dgeC51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5dgec61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5dgeC61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5dgec71 c7:2-122 HTH HTH FF domain
e5dgeC71 C7:2-126 HTH HTH FF domain
e5dgec81 c8:2-146 HhH/H2TH H2TH H2TH
e5dgeC81 C8:2-146 HhH/H2TH H2TH H2TH
e5dgec91 c9:2-144 HTH HTH winged
e5dgeC91 C9:2-144 HTH HTH winged
e5dged01 d0:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5dgeD01 D0:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5dged11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5dgeD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5dged21 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5dged22 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5dgeD21 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5dgeD22 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5dged31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgeD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dged41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dgeD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dged51 d5:37-105 HTH HTH winged
e5dgeD51 D5:36-105 HTH HTH winged
e5dged61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dgeD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dged71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dged81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgeD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dged91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dgeD91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dgee01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5dgeE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5dgee11 e1:77-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeE11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgef1 f:10-84 SH3 SH3 SH3
e5dgef2 f:85-157 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgel22 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgel21 l2:99-253 SH3 SH3 SH3
e5dgeL21 L2:99-253 SH3 SH3 SH3
e5dgeL22 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgel31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5dgeL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5dgel42 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5dgel41 l4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5dgeL41 L4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5dgeL42 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5dgel51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5dgeL51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5dgel61 l6:2-176 SH3 SH3 SH3
e5dgeL61 L6:2-109,L6:129-176 SH3 SH3 SH3
e5dgel71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5dgeL71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5dgel81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgeL81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgel92 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dgel91 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dgeL92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dgeL91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dgem01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5dgeM01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5dgem11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5dgeM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5dgem22 m2:9-87 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e5dgem21 m2:88-163 HTH HTH Ribosomal protein L11, C-terminal domain
e5dgem31 m3:2-195 RPL13 RPL13 RPL13
e5dgeM31 M3:2-194 RPL13 RPL13 RPL13
e5dgem41 m4:2-138 SH3 SH3 SH3
e5dgeM41 M4:3-138 SH3 SH3 SH3
e5dgem51 m5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dgeM51 M5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dgem61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5dgeM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5dgem71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5dgeM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5dgem81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5dgeM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5dgem92 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5dgem91 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5dgeM91 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5dgeM92 M9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5dgen02 n0:1-69 GP2-like RplX-like RplX-like
e5dgen01 n0:70-172 GP2-like RplX-like RplX-like
e5dgeN02 N0:70-172 GP2-like RplX-like RplX-like
e5dgeN01 N0:1-69 GP2-like RplX-like RplX-like
e5dgen11 n1:2-160 SH3 SH3 SH3
e5dgeN11 N1:2-160 SH3 SH3 SH3
e5dgen21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5dgeN21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5dgen31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5dgeN31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5dgen41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dgeN41 N4:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5dgen51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dgeN51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dgen61 n6:2-127 SH3 SH3 SH3
e5dgeN61 N6:2-127 SH3 SH3 SH3
e5dgen71 n7:2-136 SH3 SH3 SH3
e5dgeN71 N7:2-136 SH3 SH3 SH3
e5dgen81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5dgeN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5dgen91 n9:2-59 RPL29 RPL29 RPL29
e5dgeN91 N9:2-59 RPL29 RPL29 RPL29
e5dgeo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgeO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5dgeo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5dgeO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5dgeo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5dgeO21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5dgeo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5dgeO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5dgeo41 o4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5dgeO41 O4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5dgeo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5dgeO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5dgeo61 o6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5dgeO61 O6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5dgeo71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeO71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeo81 o8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5dgeO81 O8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5dgeo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5dgeO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5dgep01 p0:3-107,p0:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e5dgep11 p1:1-47 60S acidic ribosomal protein P1/P2 60S acidic ribosomal protein P1/P2 60S acidic ribosomal protein P1/P2
e5dgep21 p2:1-46 60S acidic ribosomal protein P1/P2 60S acidic ribosomal protein P1/P2 60S acidic ribosomal protein P1/P2
e5dgeq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5dgeQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5dgeq21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dgeQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dges01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5dgeS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5dges12 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5dges11 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5dgeS11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5dgeS12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5dges23 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5dges21 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5dges22 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5dgeS22 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5dgeS23 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5dgeS21 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5dges31 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5dges32 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5dgeS31 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5dgeS32 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5dges43 s4:176-261 SH3 SH3 SH3
e5dges41 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5dges42 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgeS43 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dgeS42 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5dgeS41 S4:176-261 SH3 SH3 SH3
e5dges51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5dgeS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5dges61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5dgeS61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5dges72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5dges71 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5dgeS72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5dgeS71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5dges81 s8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5dgeS81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5dges91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5dgeS91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5dgesM1 sM:23-85,sM:119-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5dgeSM1 SM:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5dgesR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e5dgeSR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed