Domain ID e5fdv1m1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: H2TH
  • T: H2TH
  • F: Ribosomal_S13
UID: 001733279
Type: Automatic domain
Parent: e4v4vAM1
Range: 1m:2-117
Ligands: A MG
PDB: 5fdv
PDB Description: 30S ribosomal protein S13
UniProt: P80377
Hsap BLAST neighbor: P62269
Species:

Structure of domain e5fdv1m1

Domains in the same chain:

Download Pymol

e5fdv1m1 1m:2-117 HhH/H2TH H2TH H2TH

Domains in the same PDB:

e5fdv101 10:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5fdv111 11:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5fdv121 12:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5fdv131 13:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5fdv141 14:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5fdv151 15:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5fdv161 16:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5fdv171 17:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5fdv181 18:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5fdv191 19:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5fdv1b1 1b:7-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5fdv1c1 1c:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5fdv1c2 1c:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5fdv1d1 1d:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5fdv1D1 1D:127-276 SH3 SH3 SH3
e5fdv1D2 1D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv1e1 1e:74-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5fdv1e2 1e:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5fdv1E1 1E:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e5fdv1f1 1f:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5fdv1F1 1F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5fdv1g1 1g:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5fdv1G1 1G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5fdv1h1 1h:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5fdv1h2 1h:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5fdv1H1 1H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5fdv1H2 1H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5fdv1i1 1i:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5fdv1I1 1I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5fdv1I2 1I:54-147 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5fdv1j1 1j:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5fdv1k1 1k:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5fdv1l1 1l:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv1m1 1m:2-117 HhH/H2TH H2TH H2TH
e5fdv1n1 1n:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5fdv1N1 1N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5fdv1o1 1o:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5fdv1O1 1O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5fdv1p1 1p:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5fdv1P1 1P:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5fdv1q1 1q:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv1Q1 1Q:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5fdv1r1 1r:20-87 HTH HTH tri-helical
e5fdv1R1 1R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5fdv1s1 1s:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5fdv1S1 1S:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5fdv1t1 1t:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5fdv1T1 1T:1-131 SH3 SH3 SH3
e5fdv1U1 1U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5fdv1V1 1V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5fdv1W1 1W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5fdv1x1 1x:2-98 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)
e5fdv1X1 1X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5fdv1Y1 1Y:1-107 SH3 SH3 SH3
e5fdv1Z1 1Z:93-203 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5fdv1Z2 1Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5fdv201 20:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5fdv211 21:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5fdv221 22:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5fdv231 23:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5fdv241 24:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5fdv251 25:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5fdv261 26:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5fdv271 27:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5fdv281 28:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5fdv291 29:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5fdv2b1 2b:7-237 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5fdv2c1 2c:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5fdv2c2 2c:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5fdv2d1 2d:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5fdv2D1 2D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv2D2 2D:127-276 SH3 SH3 SH3
e5fdv2e2 2e:74-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5fdv2e1 2e:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5fdv2E1 2E:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e5fdv2f1 2f:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5fdv2F1 2F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5fdv2g1 2g:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5fdv2G1 2G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5fdv2h2 2h:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5fdv2h1 2h:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5fdv2H2 2H:3-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5fdv2H1 2H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5fdv2i1 2i:2-127 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5fdv2I1 2I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5fdv2I2 2I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5fdv2j1 2j:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5fdv2k1 2k:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5fdv2l1 2l:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv2m1 2m:3-116 HhH/H2TH H2TH H2TH
e5fdv2n1 2n:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5fdv2N1 2N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5fdv2o1 2o:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5fdv2O1 2O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5fdv2p1 2p:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5fdv2P1 2P:1-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5fdv2q1 2q:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5fdv2Q1 2Q:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5fdv2r1 2r:20-87 HTH HTH tri-helical
e5fdv2R1 2R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5fdv2s1 2s:2-84 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5fdv2S1 2S:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5fdv2t1 2t:6-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5fdv2T1 2T:1-131 SH3 SH3 SH3
e5fdv2U1 2U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5fdv2V1 2V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5fdv2W1 2W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5fdv2x1 2x:3-98 dsRBD-like Ribosome binding protein Y (YfiA homologue) Ribosome binding protein Y (YfiA homologue)
e5fdv2X1 2X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5fdv2Y1 2Y:1-107 SH3 SH3 SH3
e5fdv2Z2 2Z:93-201 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5fdv2Z1 2Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like