ECOD: domain e5fj9I2

Domain ID e5fj9I2

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: TFIIS_C

UID:	001715121
Type:	Automatic domain
Parent:	e1tfiA1
Range:	I:49-110
PDB:	5fj9
PDB Description:	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC10
UniProt:	Q04307
Hsap BLAST neighbor:	Q9Y2Y1
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e5fj9I1	I:1-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5fj9I2	I:49-110	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e5fj9A6	A:2-358	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e5fj9A9	A:359-402,A:466-551	cradle loop barrel	RIFT-related	double psi
e5fj9A7	A:403-465	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5fj9A1	A:552-710	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e5fj9A3	A:711-919	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e5fj9A8	A:920-1084	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e5fj9A4	A:1085-1136,A:1318-1460	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e5fj9A5	A:1137-1164,A:1272-1317	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5fj9A2	A:1165-1271	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5fj9B3	B:36-200,B:376-516	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5fj9B1	B:201-375	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e5fj9B5	B:517-605	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e5fj9B7	B:606-745	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e5fj9B6	B:746-782,B:907-1029	cradle loop barrel	RIFT-related	double psi
e5fj9B2	B:783-906	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e5fj9B4	B:1030-1149	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5fj9C1	C:1-75,C:222-335	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e5fj9C2	C:76-221	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e5fj9D1	D:1-71,D:98-161	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e5fj9E2	E:1-143	Restriction endonuclease-like	Eukaryotic RPB5 N-terminal domain	Eukaryotic RPB5 N-terminal domain
e5fj9E1	E:144-215	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e5fj9F1	F:71-153	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e5fj9G2	G:2-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e5fj9G1	G:79-212	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5fj9H1	H:1-146	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5fj9I1	I:1-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5fj9I2	I:49-110	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5fj9J1	J:1-67	HTH	RPB10	RPB10
e5fj9K1	K:42-142	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e5fj9L1	L:26-70	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5fj9N1	N:274-315,N:360-422	triple barrel	triple barrel	Rap30/74 interaction domains-like
e5fj9O5	O:31-129	HTH	HTH	winged
e5fj9O4	O:130-282	HTH	HTH	winged
e5fj9O3	O:283-364,O:453-480	HTH	HTH	winged
e5fj9O1	O:481-567	HTH	HTH	winged
e5fj9O2	O:568-654	Long alpha-hairpin	RPC62 helical hairpin domain	RPC62 helical hairpin domain
e5fj9P1	P:171-189,P:215-271	HTH	HTH	winged