ECOD: domain e5gm6A3

Domain ID e5gm6A3

A: alpha complex topology
X: Pre-mRNA-splicing factor 8 N-terminal domain
H: Pre-mRNA-splicing factor 8 N-terminal domain
T: Pre-mRNA-splicing factor 8 N-terminal domain
F: PRO8NT,PROCN

UID:	001887235
Type:	Automatic domain
Parent:	e5ganA1
Range:	A:127-431,A:451-883
PDB:	5gm6
PDB Description:	Pre-mRNA-splicing factor 8
UniProt:	P33334
Hsap BLAST neighbor:	Q6P2Q9
Species:

Domains in the same chain:

Download Pymol

e5gm6A3	A:127-431,A:451-883	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5gm6A4	A:884-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5gm6A5	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5gm6A6	A:1575-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5gm6A1	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5gm6A2	A:2149-2413	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like

Domains in the same PDB:

e5gm6a2	a:126-171	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e5gm6a1	a:172-259	RING/U-box-like	RING/U-box-like	RING/U-box
e5gm6A3	A:127-431,A:451-883	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5gm6A4	A:884-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5gm6A5	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5gm6A6	A:1575-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5gm6A1	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5gm6A2	A:2149-2413	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e5gm6b1	b:4-170	Cyclophilin-like	Cyclophilin-like	Cyclophilin-like
e5gm6B11	B:113-192	PWI domain-like	Pre-mRNA-splicing helicase BRR2 plug domain	Pre-mRNA-splicing helicase BRR2 plug domain
e5gm6B1	B:420-700	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6B3	B:701-907	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6B8	B:907-1003	HTH	HTH	winged
e5gm6B7	B:1004-1142	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5gm6B12	B:1142-1199	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5gm6B6	B:1199-1340	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5gm6B2	B:1341-1541	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6B4	B:1542-1741	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6B10	B:1740-1824	HTH	HTH	winged
e5gm6B5	B:1825-1989	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5gm6B13	B:1989-2049	HhH/H2TH	SAM-like subdomain in Sec63-like proteins	SAM-like subdomain in Sec63-like proteins
e5gm6B9	B:2049-2163	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5gm6c1	c:9-59	HTH	HTH	tri-helical
e5gm6c2	c:60-111	HTH	HTH	tri-helical
e5gm6C1	C:118-456	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6C5	C:457-510,C:530-587	cradle loop barrel	RIFT-related	Alanine racemase-C
e5gm6C3	C:588-676	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5gm6C2	C:677-857	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5gm6C4	C:858-975	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5gm6d1	d:40-275,d:295-297	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5gm6e1	e:9-94	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5gm6e2	e:96-182	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5gm6F1	F:56-299,F:324-451,F:472-483	beta-propeller-like	beta-propeller	7-bladed
e5gm6F4	F:452-784,F:815-851	beta-propeller-like	beta-propeller	7-bladed
e5gm6F2	F:852-890,F:918-1231	beta-propeller-like	beta-propeller	7-bladed
e5gm6F3	F:1232-1261,F:1298-1361	HTH	HTH	tri-helical
e5gm6g1	g:15-108	SH3	SH3	SH3
e5gm6G1	G:16-74,G:156-971	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5gm6h1	h:12-83	SH3	SH3	SH3
e5gm6i1	i:10-92	SH3	SH3	SH3
e5gm6I1	I:1-105	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers
e5gm6j1	j:2-76	SH3	SH3	SH3
e5gm6J1	J:2-18,J:42-54,J:82-104	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5gm6J3	J:21-27,J:55-70	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5gm6J2	J:28-43,J:71-83	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5gm6k1	k:4-55,k:75-102	SH3	SH3	SH3
e5gm6K1	K:1-84	RDS3 complex subunit 10	RDS3 complex subunit 10	RDS3 complex subunit 10
e5gm6l1	l:4-85	SH3	SH3	SH3
e5gm6m1	m:1-48,m:76-109	SH3	SH3	SH3
e5gm6O1	O:111-447	beta-propeller-like	beta-propeller	7-bladed
e5gm6q1	q:1-61	RING/U-box-like	RING/U-box-like	RING/U-box
e5gm6q2	q:144-493	beta-propeller-like	beta-propeller	8-bladed
e5gm6Q1	Q:3-126	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e5gm6Q2	Q:202-264,Q:288-296	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5gm6r1	r:1-51	RING/U-box-like	RING/U-box-like	RING/U-box
e5gm6R2	R:1-129	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e5gm6R1	R:130-227	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5gm6T1	T:1-157	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31
e5gm6U1	U:22-206	SMAD/FHA domain	SMAD/FHA domain	SMAD/FHA domain
e5gm6v1	v:551-753	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5gm6V1	V:2-129	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5gm6Y3	Y:210-401,Y:575-609	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6Y2	Y:402-574	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5gm6Y1	Y:610-755	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5gm6Y4	Y:756-868	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5gm6Z1	Z:8-247	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5gm6Z2	Z:279-485	Repetitive alpha hairpins	ARM repeat	ARM repeat