Domain ID e5ibb3E1

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Alpha-L RNA-binding motif
  • F: Ribosomal_S4,S4
UID: 001839687
Type: Automatic domain
Parent: e4v4vAD1
Range: 3E:3-209
Ligands: SF4
PDB: 5ibb
PDB Description: 30S ribosomal protein S4
UniProt: P80373
Species:

Structure of domain e5ibb3E1

Domains in the same chain:

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e5ibb3E1 3E:3-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif

Domains in the same PDB:

e5ibb112 11:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb111 11:127-274 SH3 SH3 SH3
e5ibb121 12:13-226 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ibb151 15:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ibb192 19:127-275 SH3 SH3 SH3
e5ibb191 19:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb1A1 1A:11-95 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ibb1E1 1E:5-239 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ibb1I1 1I:7-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ibb211 21:1-203 cradle loop barrel RIFT-related Alanine racemase-C
e5ibb222 22:107-204 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ibb221 22:3-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ibb251 25:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ibb291 29:1-204 cradle loop barrel RIFT-related Alanine racemase-C
e5ibb2A1 2A:14-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ibb2E2 2E:107-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ibb2E1 2E:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ibb2I1 2I:16-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ibb311 31:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ibb321 32:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ibb351 35:1-147 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ibb391 39:3-206 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ibb3A1 3A:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb3E1 3E:3-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ibb3I1 3I:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb411 41:3-181 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ibb422 42:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ibb421 42:74-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ibb451 45:2-140 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ibb491 49:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ibb4A1 4A:8-118 HhH/H2TH H2TH H2TH
e5ibb4E1 4E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ibb4E2 4E:74-153 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ibb4I1 4I:2-120 HhH/H2TH H2TH H2TH
e5ibb511 51:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ibb512 51:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ibb521 52:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5ibb551 55:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5ibb581 58:1-137 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ibb592 59:83-172 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ibb591 59:6-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ibb5A1 5A:3-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ibb5E1 5E:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5ibb5I1 5I:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ibb612 61:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5ibb611 61:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5ibb621 62:2-149 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ibb651 65:3-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ibb681 68:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ibb691 69:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5ibb692 69:54-145 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5ibb6A1 6A:2-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ibb6E1 6E:2-155 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ibb6I1 6I:2-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ibb711 71:3-69,71:163-228 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e5ibb721 72:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ibb722 72:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ibb751 75:1-133 SH3 SH3 SH3
e5ibb781 78:1-147 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ibb791 79:5-57,79:165-172,79:198-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e5ibb7A1 7A:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5ibb7E2 7E:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ibb7E1 7E:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ibb7I1 7I:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5ibb821 82:5-125 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ibb851 85:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5ibb881 88:1-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ibb8A1 8A:2-100 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb8E1 8E:3-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ibb8I1 8I:2-101 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ibb951 95:1-100 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5ibb981 98:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5ibb9A1 9A:20-86 HTH HTH tri-helical
e5ibb9I1 9I:20-87 HTH HTH tri-helical
e5ibbA51 A5:1-111 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ibbA81 A8:2-112 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ibbAA1 AA:5-77 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ibbAI1 AI:2-83 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ibbB51 B5:1-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ibbB81 B8:1-136 SH3 SH3 SH3
e5ibbBA1 BA:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5ibbBI1 BI:9-105 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5ibbC51 C5:2-105 SH3 SH3 SH3
e5ibbC81 C8:2-116 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5ibbD51 D5:94-103,D5:123-171 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5ibbD52 D5:3-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ibbD81 D8:1-100 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5ibbE51 E5:8-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5ibbE81 E8:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ibbF51 F5:2-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5ibbF81 F8:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ibbG51 G5:2-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ibbG81 G8:2-104 SH3 SH3 SH3
e5ibbH51 H5:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ibbH82 H8:94-170 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5ibbH81 H8:1-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ibbI51 I5:1-63 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5ibbI81 I8:8-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5ibbJ51 J5:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ibbJ81 J8:2-95 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5ibbK81 K8:2-69 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ibbL51 L5:1-47 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5ibbL81 L8:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ibbM51 M5:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5ibbM81 M8:1-64 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e5ibbN81 N8:3-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ibbP81 P8:1-47 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5ibbQ81 Q8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p