Domain ID e5mc6AO1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L40e
UID: 001945880
Type: Automatic domain
Parent: e4v7eCm1
Range: AO:77-128
PDB: 5mc6
PDB Description: Ubiquitin-60S ribosomal protein L40
UniProt: P0CH08
Hsap BLAST neighbor: P62987
Species:

Structure of domain e5mc6AO1

Domains in the same chain:

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e5mc6AO1 AO:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5mc6a1 a:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5mc6A2 A:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5mc6A1 A:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5mc6AA1 AA:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e5mc6AB1 AB:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5mc6AC1 AC:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5mc6AD2 AD:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5mc6AD1 AD:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5mc6AE1 AE:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5mc6AF1 AF:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6AG1 AG:6-112,AG:132-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5mc6AH1 AH:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5mc6AI1 AI:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5mc6AJ1 AJ:2-194 RPL13 RPL13 RPL13
e5mc6AK1 AK:2-127 SH3 SH3 SH3
e5mc6AL1 AL:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5mc6AM1 AM:3-138 SH3 SH3 SH3
e5mc6AN1 AN:2-136 SH3 SH3 SH3
e5mc6AO1 AO:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6AP1 AP:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6AQ1 AQ:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5mc6AR1 AR:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5mc6AS1 AS:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5mc6AT1 AT:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6AU1 AU:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5mc6AV1 AV:2-59 RPL29 RPL29 RPL29
e5mc6AW2 AW:99-253 SH3 SH3 SH3
e5mc6AW1 AW:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6AX1 AX:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5mc6AY1 AY:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5mc6b1 b:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5mc6b2 b:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5mc6B1 B:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5mc6BA1 BA:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5mc6BB1 BB:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5mc6BC1 BC:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5mc6BD1 BD:1-220 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5mc6BE1 BE:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5mc6BE2 BE:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5mc6BF2 BF:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5mc6BF1 BF:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5mc6BG1 BG:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5mc6BH1 BH:1-69 GP2-like RplX-like RplX-like
e5mc6BH2 BH:70-172 GP2-like RplX-like RplX-like
e5mc6BI1 BI:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5mc6BJ1 BJ:2-160 SH3 SH3 SH3
e5mc6BK1 BK:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5mc6BL1 BL:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5mc6BM1 BM:2-109,BM:129-176 SH3 SH3 SH3
e5mc6BN1 BN:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5mc6BO1 BO:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5mc6BP1 BP:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5mc6BT2 BT:4-84 SH3 SH3 SH3
e5mc6BT1 BT:85-157 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6c1 c:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6C1 C:1-96 HTH HTH winged
e5mc6d1 d:2-133 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5mc6D1 D:23-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5mc6e1 e:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5mc6E1 E:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5mc6f1 f:30-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6F1 F:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5mc6g1 g:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5mc6G1 G:2-97 HTH HTH FF domain
e5mc6h3 h:8-268 Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region Antiviral helicase Ski2 N-terminal extended region
e5mc6h2 h:271-274,h:301-505 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5mc6h1 h:506-541,h:597-800 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5mc6h6 h:799-851 HTH HTH winged
e5mc6h5 h:892-1033 SH3 SH3 SH3
e5mc6h7 h:1034-1120 HTH HTH winged
e5mc6h4 h:1121-1287 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5mc6H1 H:2-66,H:90-146 HhH/H2TH H2TH H2TH
e5mc6i1 i:1-338,i:399-1432 Repetitive alpha hairpins ARM repeat ARM repeat
e5mc6I1 I:2-144 HTH HTH winged
e5mc6j1 j:2-397 beta-propeller-like beta-propeller 7-bladed
e5mc6J1 J:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5mc6k1 k:3-397 beta-propeller-like beta-propeller 7-bladed
e5mc6K1 K:36-105 HTH HTH winged
e5mc6L1 L:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6M1 M:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5mc6N1 N:102-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5mc6O1 O:2-319 beta-propeller-like beta-propeller 7-bladed
e5mc6P1 P:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5mc6Q1 Q:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5mc6Q2 Q:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5mc6R2 R:35-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5mc6R1 R:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5mc6R3 R:176-254 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5mc6S1 S:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5mc6S3 S:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6S2 S:176-261 SH3 SH3 SH3
e5mc6T1 T:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5mc6U2 U:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5mc6U1 U:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5mc6V1 V:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5mc6W1 W:9-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5mc6X1 X:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5mc6Y1 Y:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5mc6Y2 Y:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5mc6Z1 Z:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like