ECOD: domain e5mc6L1

Domain ID e5mc6L1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Ribosomal_S28e

UID:	001945841
Type:	Automatic domain
Parent:	e1ny4A1
Range:	L:5-67
PDB:	5mc6
PDB Description:	40S ribosomal protein S28-B
UniProt:	P0C0X0
Hsap BLAST neighbor:	P62857
Species:

Domains in the same chain:

Download Pymol

e5mc6L1	L:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e5mc6a1	a:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5mc6A2	A:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5mc6A1	A:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5mc6AA1	AA:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5mc6AB1	AB:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5mc6AC1	AC:24-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e5mc6AD2	AD:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5mc6AD1	AD:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e5mc6AE1	AE:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5mc6AF1	AF:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6AG1	AG:6-112,AG:132-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e5mc6AH1	AH:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5mc6AI1	AI:2-78	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5mc6AJ1	AJ:2-194	RPL13	RPL13	RPL13
e5mc6AK1	AK:2-127	SH3	SH3	SH3
e5mc6AL1	AL:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e5mc6AM1	AM:3-138	SH3	SH3	SH3
e5mc6AN1	AN:2-136	SH3	SH3	SH3
e5mc6AO1	AO:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6AP1	AP:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6AQ1	AQ:2-175	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5mc6AR1	AR:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5mc6AS1	AS:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e5mc6AT1	AT:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6AU1	AU:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e5mc6AV1	AV:2-59	RPL29	RPL29	RPL29
e5mc6AW2	AW:99-253	SH3	SH3	SH3
e5mc6AW1	AW:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6AX1	AX:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e5mc6AY1	AY:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5mc6b1	b:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5mc6b2	b:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5mc6B1	B:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5mc6BA1	BA:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e5mc6BB1	BB:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e5mc6BC1	BC:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e5mc6BD1	BD:1-220	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e5mc6BE1	BE:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e5mc6BE2	BE:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5mc6BF2	BF:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e5mc6BF1	BF:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e5mc6BG1	BG:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e5mc6BH1	BH:1-69	GP2-like	RplX-like	RplX-like
e5mc6BH2	BH:70-172	GP2-like	RplX-like	RplX-like
e5mc6BI1	BI:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5mc6BJ1	BJ:2-160	SH3	SH3	SH3
e5mc6BK1	BK:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e5mc6BL1	BL:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e5mc6BM1	BM:2-109,BM:129-176	SH3	SH3	SH3
e5mc6BN1	BN:2-113	Glucocorticoid receptor-like	RPL34	RPL34
e5mc6BO1	BO:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e5mc6BP1	BP:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e5mc6BT2	BT:4-84	SH3	SH3	SH3
e5mc6BT1	BT:85-157	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6c1	c:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6C1	C:1-96	HTH	HTH	winged
e5mc6d1	d:2-133	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5mc6D1	D:23-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5mc6e1	e:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5mc6E1	E:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5mc6f1	f:30-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6F1	F:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5mc6g1	g:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5mc6G1	G:2-97	HTH	HTH	FF domain
e5mc6h3	h:8-268	Antiviral helicase Ski2 N-terminal extended region	Antiviral helicase Ski2 N-terminal extended region	Antiviral helicase Ski2 N-terminal extended region
e5mc6h2	h:271-274,h:301-505	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5mc6h1	h:506-541,h:597-800	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5mc6h6	h:799-851	HTH	HTH	winged
e5mc6h5	h:892-1033	SH3	SH3	SH3
e5mc6h7	h:1034-1120	HTH	HTH	winged
e5mc6h4	h:1121-1287	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5mc6H1	H:2-66,H:90-146	HhH/H2TH	H2TH	H2TH
e5mc6i1	i:1-338,i:399-1432	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5mc6I1	I:2-144	HTH	HTH	winged
e5mc6j1	j:2-397	beta-propeller-like	beta-propeller	7-bladed
e5mc6J1	J:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5mc6k1	k:3-397	beta-propeller-like	beta-propeller	7-bladed
e5mc6K1	K:36-105	HTH	HTH	winged
e5mc6L1	L:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6M1	M:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5mc6N1	N:102-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5mc6O1	O:2-319	beta-propeller-like	beta-propeller	7-bladed
e5mc6P1	P:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5mc6Q1	Q:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5mc6Q2	Q:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5mc6R2	R:35-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5mc6R1	R:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5mc6R3	R:176-254	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5mc6S1	S:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5mc6S3	S:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6S2	S:176-261	SH3	SH3	SH3
e5mc6T1	T:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5mc6U2	U:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5mc6U1	U:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5mc6V1	V:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5mc6W1	W:9-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5mc6X1	X:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5mc6Y1	Y:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5mc6Y2	Y:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5mc6Z1	Z:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like